Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2878 ATGCATCCTTTTTGCTGCGTATCCGCCGTCTCCGACCAGTCTTCTCCGGTAAAACCTACGCCCGCGGCTCACTTCGCGGACTTCACCATGCCTCCTCTCCCCTCCGCCGCCGTCAGATCCGATTCAGCCCCACGCCACAGTCACAGCCACAGTTACGGCAGCAACCACTCCGCCGGCGGTGGCAGCAGCAGCAGCAACAACAACCACAACAACAACAACAATAATAACAACAACGGAGACCACGGGCGGGGGAGCCAGCAACAACAGCAGCGGGAGCAACCGCCGCCGCCGGTGGTGGTTGATGTGAAGATCAACGACCTCGTCGGAAATGGAATCTCGGGAATACTGTACAAGTGGGTGAATTATGGCAAAGGATGGAGGCCACGGTGGTTCGTGCTCCAAGACGGCGTTCTCTCCTACTACAAGATTCACGGTCCTGATAAGATCGTCGTGAATCCCGAGACCGAGAAGGGCTCCAAGGTCATCGGCGAGGAATCCATGCGCAGGATCTCTCGCAACCGCAATTCCCAATCCCAACACCACCGTCGAAAGCCCTTCGGTGAAATCCACCTCAAGGTTTCGACGATTCGAGAGAGCAAATCCGATGATAAGAGGTTTTCGGTGTTCACGGGAACGAAGAGGATGCACCTGAGGGCAGAGACGAGGGAGGATCGGACGGTGTGGATGGAGGCGCTGCAAGCGGTGAAGGACATGTTCCCAAGGATTTCGAACAGCGAGCTGATGGCGCCCGTGGACAATGTGAGCGTCTCGACGGAGAAGCTGAGGCAGAGGCTTCTAGAAGAACGGGTGAGTGAGGCTGCCATTCAGGATAGCGAGCAGATCATGAGGACAGAGTTTGCGGCGCTGCAGAACCAGCTTAAGCTCCTCAAGCAGAAGCAGTCAATGCTCATTGACACATTGCGCCACTTAGAGACAGAAAAGGTCGATCTGGAAAATACAGTTGTTGATGAGAGCCAAAGACAGTGGAATGATCAAGAGACTTCCTCCACATTAAGGCAGGAAAAATCTAGTGAAGGAAGTGCAAGTGAATCTGAGGATGATAACGAGAGAAATGATGCTGCAGAAGAAGAAACAGATGATGAAGACAATGCCTTTTTTGACACCCGCGATTTTCTATCGTCCAGTTCTTTCAAAAGTAATGGGTCTGATTATAGAGTATCATCTTTCTCTTCTGATGATGATGGGTTCTATGCATTCGAATCGGAGGATGATGTAGATCCAGCCATTAGATCTGTTGGAAGCAACTACCCTCATGTTAAGCGGCGTAAGAAATTGCCTGACCCTGTAGAGAAAGAGAAAGGTGTGAGTCTCTGGTCAATGATTAAGGATAATATAGGGAAGGATCTAACTAAAGTTTGCCTCCCTGTTTATTTTAATGAGCCACTCTCCTCCCTGCAAAAATGTTTTGAAGAAATGGAATATTCACATCTGCTTGACCAAGCATACGAATGGGGAAGAAGGGGTAATAGCCTCATGAGGATTCTCTGTGTTGCTGCTTTTGCTGTATCTGGTTATGCTTCAACTGACGGAAGAGTTTGCAAACCATTTAATCCATTACTCGGGGAAACATATGAGGCTAACTTTCCAGACAAAGGGCTTCGATTTTTCTCAGAAAAGGTCAGTCATCACCCAATGATAGTTGCGTGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGGCGATAGCAACTTAAAGAGCAAATTTTGGGGCCGATCAATTCAGCTTGACCCTGTCGGTACTTTGACCTTGGAATTTGAGGATGGGGAGGTTTTCCAGTGGAGCAAGGTTACTACATCAATATACAATCTTATATTAGGAAAGCTGTACTGTGATCACTATGGAACAATGTGTATACAGGGAAACCAAGAATATTCATGTAAGCTGAAATTCAAGGAACAGTCTATAATTGATCGAAATCCTCACCAGGTCCATGGTATCGTTCAAGATAGGAATGGAAAAACAGTATCTACTTTGTTTGGAAAATGGGATGAAAGCATGCATTATGTTAACGGAGACTACAGTGCAAAGGGAAAAGCTCACGAATCCTTATCAGAAGCCCGACTACTCTGGAAGAGAAGCAAGCCTCCCAAATTTCCCACTAGATATAACTTCACTCGTTTTGCCATCACATTAAATGAACTTACCCCTGGATTGAAGGAAAAGTTGCCACCGACTGATTCCAGGTTAAGACCAGACCAAAGGTATCTGGAAAATGGGGAATATGAGATGGCAAATTCAGAAAAGTTACGGCTAGAGCAGAGGCAGCGACAGGCTCGGAAGATGCAAGAGAGGGGTTGGAAACCACGATGGTTTGCCAAGGATAAAGCAACCGGCACATACCGATACCTAGGAGGATATTGGGAGTCCCGAGAAGAAGGGACCTGGGACTCCTGTCCTGACATCTTTGGCCAAATTCCTTCAGACCATCTTTCCGACGAAGGTCAAACTGCATCTTAG 2478 0.479 MHPFCCVSAVSDQSSPVKPTPAAHFADFTMPPLPSAAVRSDSAPRHSHSHSYGSNHSAGGGSSSSNNNHNNNNNNNNNGDHGRGSQQQQQREQPPPPVVVDVKINDLVGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIVVNPETEKGSKVIGEESMRRISRNRNSQSQHHRRKPFGEIHLKVSTIRESKSDDKRFSVFTGTKRMHLRAETREDRTVWMEALQAVKDMFPRISNSELMAPVDNVSVSTEKLRQRLLEERVSEAAIQDSEQIMRTEFAALQNQLKLLKQKQSMLIDTLRHLETEKVDLENTVVDESQRQWNDQETSSTLRQEKSSEGSASESEDDNERNDAAEEETDDEDNAFFDTRDFLSSSSFKSNGSDYRVSSFSSDDDGFYAFESEDDVDPAIRSVGSNYPHVKRRKKLPDPVEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEEMEYSHLLDQAYEWGRRGNSLMRILCVAAFAVSGYASTDGRVCKPFNPLLGETYEANFPDKGLRFFSEKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGTLTLEFEDGEVFQWSKVTTSIYNLILGKLYCDHYGTMCIQGNQEYSCKLKFKEQSIIDRNPHQVHGIVQDRNGKTVSTLFGKWDESMHYVNGDYSAKGKAHESLSEARLLWKRSKPPKFPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEYEMANSEKLRLEQRQRQARKMQERGWKPRWFAKDKATGTYRYLGGYWESREEGTWDSCPDIFGQIPSDHLSDEGQTAS* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2878 825 Gene3D - 529 703 - -
Ahy17g2878 825 Gene3D - 110 239 IPR011993 -
Ahy17g2878 825 Coils Coil 307 327 - -
Ahy17g2878 825 CDD PH_ORP_plant 112 244 - -
Ahy17g2878 825 Coils Coil 279 299 - -
Ahy17g2878 825 MobiDBLite consensus disorder prediction 36 97 - -
Ahy17g2878 825 ProSiteProfiles PH domain profile. 109 237 IPR001849 -
Ahy17g2878 825 SMART PH_update 110 239 IPR001849 -
Ahy17g2878 825 Coils Coil 748 771 - -
Ahy17g2878 825 Gene3D - 740 803 - -
Ahy17g2878 825 MobiDBLite consensus disorder prediction 355 371 - -
Ahy17g2878 825 MobiDBLite consensus disorder prediction 325 372 - -
Ahy17g2878 825 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 59 816 IPR000648 GO:0008289
Ahy17g2878 825 MobiDBLite consensus disorder prediction 325 344 - -
Ahy17g2878 825 MobiDBLite consensus disorder prediction 47 94 - -
Ahy17g2878 825 SUPERFAMILY PH domain-like 112 237 - -
Ahy17g2878 825 Pfam Oxysterol-binding protein 443 798 IPR000648 GO:0008289
Ahy17g2878 825 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 59 816 - -
Ahy17g2878 825 SUPERFAMILY Oxysterol-binding protein-like 438 817 IPR037239 -
Ahy17g2878 825 Pfam Pleckstrin homology domain 117 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2878 Ahy-Chr17 128165876 128171819 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2878 K20456 - gmx:100137077 1346.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2878 17 128165876 128171819 Ahy17g2878 17 128165876 128171819 ECH
Ahy17g2878 17 128165876 128171819 Ahy8g0593 8 11602594 11608523 hybridization