Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2876 ATGCTGTTGCGGGTTCTTCTCTTTCACTCTCTGCTGCGTTATCCTTCGTTGAGATCAAAACCAGTGAACAAAACAAGCGTTTCTTACTGCTACTGCAATAATCTCTCTGCATCCACGTTCATGGCGTCTTCAGTAGTGGATTGCAGCACACTGGTTTTATGCGGTAAATCATTGGCAGAGATAGAAGCTGCTAAAGCTATTAAGAGCAGTAACACTCTCAAGCTCCCTGACAATGGAGAACTATCAATTGTTTTGCAATCAGAATTGGATGGTGAAAATGTTATGAGAAGGTCCTTCAATGTTGATTCTTTCATGAATTCTCTTTGCACTGATACATTTGGCAGGCTTCTTGTTTGGTCGCCGCGATTAGCTTCTACACATGATGTAGTTTCACACAACTTTTGTGAGCTTCCTATTGGTTCAGTTTGTGTTGCTGATGTTCAGACCAAGGGGCGAGGTCGGTCAAAGAATGTCTGGGAGTCTCCGTTAGGTTGTCTCCTGTTTTCCTTTACTCTGCAAATGGAGGACGGGCGAATAGTTCCGTTGGTGCAGTATGTGGTTTCCCTTGCTATCACAGAAGCAGTGAAGGATATTTGCAACAAAAATGGATTACCCTCCGTTGACGTCAAAATCAAGTGGCCAAATGATCTTTATTTAAACGGCTTAAAAGTTGGCGGCATTCTTTGCACCTCAACCTATAAGTCGAAGAAGTTCAATGTCAGTGCAGGTATAGGCTTGAATGTCAGTAACGAGAAGCCAACAACATGCTTAAATACAGAACTTAGAGAATTGTCAGTGGAGGCTTACCGATTTCAAAGAGAAGATGTTCTGGCAACCTTTTTTAACAAATTTGAGACATTTTATCGTCTATTTATCGATCAAGGATTTCAAAGCCTGGAGGAGCTATATTATAAGACATGGTTGCACAGTGGACAGAGAGTTATTGTACAAGAAAAGAACGACGACAATGTGGTCGAGCATGTGGTAACTATTCAGGGTTTGACATCTTCAGGATATTTATTGGCTGTTGGTGATGATAGTCAATTGTGTGAGCTCCACCCTGATGGTAATAGCTTTGATTTTTTCAAAGGACTTGTGAGGAGGAAACTTGAGTGA 1116 0.4158 MLLRVLLFHSLLRYPSLRSKPVNKTSVSYCYCNNLSASTFMASSVVDCSTLVLCGKSLAEIEAAKAIKSSNTLKLPDNGELSIVLQSELDGENVMRRSFNVDSFMNSLCTDTFGRLLVWSPRLASTHDVVSHNFCELPIGSVCVADVQTKGRGRSKNVWESPLGCLLFSFTLQMEDGRIVPLVQYVVSLAITEAVKDICNKNGLPSVDVKIKWPNDLYLNGLKVGGILCTSTYKSKKFNVSAGIGLNVSNEKPTTCLNTELRELSVEAYRFQREDVLATFFNKFETFYRLFIDQGFQSLEELYYKTWLHSGQRVIVQEKNDDNVVEHVVTIQGLTSSGYLLAVGDDSQLCELHPDGNSFDFFKGLVRRKLE* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2876 371 PANTHER HOLOCARBOXYLASE SYNTHETASE (BIOTIN-(PROPRIONYL-COA-CARBOXYLASE (ATP-HYDROLYSING)) LIGASE) 69 369 - -
Ahy17g2876 371 SUPERFAMILY Class II aaRS and biotin synthetases 104 307 IPR045864 -
Ahy17g2876 371 CDD BPL 117 291 IPR004408 GO:0004077|GO:0036211
Ahy17g2876 371 Pfam Biotin protein ligase C terminal domain 309 364 IPR003142 GO:0036211
Ahy17g2876 371 TIGRFAM birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 121 342 IPR004408 GO:0004077|GO:0036211
Ahy17g2876 371 Gene3D Bira Bifunctional Protein; Domain 2 105 307 IPR045864 -
Ahy17g2876 371 Pfam Biotin/lipoate A/B protein ligase family 121 247 IPR004143 GO:0036211
Ahy17g2876 371 ProSiteProfiles Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) catalytic domain profile. 102 292 IPR004143 GO:0036211
Ahy17g2876 371 PANTHER BIOTIN PROTEIN LIGASE 69 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2876 Ahy-Chr17 128097700 128101664 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2876 K01942 - gmx:100818402 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2876 17 128097700 128101664 Ahy17g2876 17 128097700 128101664 ECH
Ahy17g2876 17 128097700 128101664 Ahy8g0590 8 11502076 11505963 hybridization