Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2871 ATGGCGGGCGGTGGCGGAAAGGTGTCGTTCAAGGTGATACTCACCTCTGATCCCAAGCTTCCCTTCAAAGTGTTTAGCGTTCCAGAGGCTGCGCCTTTCACTGCCGTTCTCAAATTCGCTGCCGAAGAATTCAAAGTCCCTCCTCAGACCAGCGCTATCATCACCAACGATGGTGTTGGCATAAACCCTCAGCAGAGTGCAGGGAATGTCTTTCTTAAGCATGGATCAGAACTGCGCCTGATTCCCCGTGATAGAGTTGGAGCTTCTTGCATGTTACGGGGTGTGTGA 288 0.5208 MAGGGGKVSFKVILTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGASCMLRGV* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2871 95 PIRSF Ufm1 1 89 IPR005375 GO:0071569
Ahy17g2871 95 Pfam Ubiquitin fold modifier 1 protein 7 81 IPR005375 GO:0071569
Ahy17g2871 95 Gene3D - 5 88 - -
Ahy17g2871 95 PANTHER UBIQUITIN-FOLD MODIFIER 1 1 91 IPR005375 GO:0071569
Ahy17g2871 95 CDD Ubl_UFM1 8 82 - -
Ahy17g2871 95 PANTHER UBIQUITIN-FOLD MODIFIER 1 1 91 - -
Ahy17g2871 95 SUPERFAMILY Ubiquitin-like 4 87 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2871 Ahy-Chr17 128056848 128058599 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2871 K12162 - mnt:21403060 174.866
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2871 17 128056848 128058599 Ahy17g2871 17 128056848 128058599 ECH
Ahy17g2871 17 128056848 128058599 Ahy8g0585 8 11465152 11466922 hybridization