Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2869 ATGGCTTCCGAGAAGGTTGAGACAGTTGTTGCTGGGAATTACTTAGAAATGGAGAGAGAAGAGGAAGATTCAAAATCTGCTGCTAGCAAACTTTCTAGCCTCTTCTGGCATGGTGGTTCTGTCTATGATGCATGGTTTAGCTGTGCTTCTAATCAGGTTGCACAAGTGCTATTAACACTGCCATATTCATTTTCACAACTTGGGATGGTGTCTGGGATTATATTTCAGCTTTTTTATGGACTCATGGGAAGTTGGACCGCATACCTCATAAGTGTTCTTTATGTTGAGTATAGAACAAGAAAGGAGAGGGAAAAGGTTGATTTTAGAAACCATGTAATTCAGTGGTTTGAAGTTCTTGATGGACTTTTAGGCAAACACTGGAGGAATCTTGGTCTCTTTTTCAACTGTACTTTCCTTCTCTTTGGATCTGTTATTCAACTAATTGCTTGTGCAAGTAACATATATTACATAAACGACAATCTGGACAAGAGAACCTGGACATACATATTTGGAGCATGCTGTGCAACAACAGTGTTCATACCATCTTTCCACAATTATAGGATATGGTCATTCTTGGGTTTGTTAATGACTACTTACACAGCATGGTACATGACCATAGCTTCCCTTATGCACGGCCAGGTTGAAGGGGTGAAGCACTCAGGGCCAACCAAGTTGGTTCTCTATTTCACCGGTGCTACAAACATTCTCTACACTTTTGGTGGACATGCTGTTACAGTGGAAATTATGCATGCAATGTGGAAGCCACAGAAGTTTAAGATGATATATCTGATAGCAACATTGTATGTGTTGACACTAACATTGCCATCAGCTTCAGCAGTGTATTGGGCATTTGGAGATCTGCTTCTAACACATGCCAATGCACTCTCATTGCTCCCAAGAACAGGGTTCAGGGACACAGCCGTAATTTTGATGCTGATTCACCAGTTCATAACATTTGGGTTTGCATGCACCCCACTATACTTTGTGTGGGAGAAATTCATTGGTGTTCATGAGACCAAGAGCTTGTTCAAGAGAGCATTGACCAGGCTTCCTGTGGTCATACCAATTTGGTTCCTTGCAATCATATTCCCCTTCTTTGGTCCCATCAATTCAACCGTTGGATCTCTCTTGGTCAGCTTCACTGTTTACATCATCCCTGCCTTGGCTCACATGATCACTTTCGCTCCCGCCCCTGCTAGAGAGAATGCTGTGGAGAGACCACCATCAATGTTAGGAGGTTGGGTAGGATTGTACTCCATGAATGTGTTTGTGGTGGTATGGGTTTTGGTGGTAGGGTTTGGGTTGGGAGGATGGGCAAGTATGCTTAATTTCATTCACCAAATCAACACTTTCGGACTATTTGCAAAGTGCTATCAATGTCCCCCTCACAACAAGCCTTCAATTAAATTAAATTAA 1416 0.4223 MASEKVETVVAGNYLEMEREEEDSKSAASKLSSLFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMVSGIIFQLFYGLMGSWTAYLISVLYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNLGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYMTIASLMHGQVEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKMIYLIATLYVLTLTLPSASAVYWAFGDLLLTHANALSLLPRTGFRDTAVILMLIHQFITFGFACTPLYFVWEKFIGVHETKSLFKRALTRLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHMITFAPAPARENAVERPPSMLGGWVGLYSMNVFVVVWVLVVGFGLGGWASMLNFIHQINTFGLFAKCYQCPPHNKPSIKLN* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2869 471 PANTHER OS05G0424000 PROTEIN-RELATED 3 460 - -
Ahy17g2869 471 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 3 3 460 - -
Ahy17g2869 471 Pfam Transmembrane amino acid transporter protein 37 430 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2869 Ahy-Chr17 128028427 128032340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2869 1 466 Organic Solute Cotransporters AT1G77690 87.473 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2869 K13946 - gmx:100815243 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2869 17 128028427 128032340 Ahy17g2869 17 128028427 128032340 ECH
Ahy17g2869 17 128028427 128032340 Ahy8g0584 8 11425254 11428816 hybridization