Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2856 ATGAAGCTAAGATCTCCAATTACTCTCCTCTTCCTCTTCTTCATCGCTGAATCTCATGCCATCTGGCTAACCATCCCTACTTCCGGAACCAAGTGTGTCTCCGAAGATATCCAGTCCAACGTCGTCGTTTTAGCCGATTACTATGTTGTCGCTGATGAAGTTGACCATCACCAGATCCACACCGTCTCTCTCAAGGTAACATCTCCTTATGGAAACAACCTTCACCAGAAAGAAAATGTTACCCATGGCCAGTTTGCATTTACAAGCGCCGAGAGTGGGACCTACTTGGCCTGCTTCTGGCTGCAAAACAACCATCAACAACCAACTGTAACTGTTAGCCTTGACTGGAGAACTGGCATTTCTGCCAAGGACTGGGAAACCGTTGCCAAAAAAGAAAAGATTCAGGGTGTTGAACTTGAGCTAAGGAAACTTGAAGCAGCTGTGGAAGCCATCCGCGAAAATCTGATTTATTTGAAGAACAGGGAAGCTGATATGAGGGAGGTTAGCGAATCGACGAATGCTAAAGTGGCTTGGTTCAGTATCATGTCTCTTGGTCTCTGCATTATTGTTGCAGCCTTGCAGCTGTGGTATCTGAAGCGATATTTTAGGAAGAAGAAGCTCATATAA 627 0.453 MKLRSPITLLFLFFIAESHAIWLTIPTSGTKCVSEDIQSNVVVLADYYVVADEVDHHQIHTVSLKVTSPYGNNLHQKENVTHGQFAFTSAESGTYLACFWLQNNHQQPTVTVSLDWRTGISAKDWETVAKKEKIQGVELELRKLEAAVEAIRENLIYLKNREADMREVSESTNAKVAWFSIMSLGLCIIVAALQLWYLKRYFRKKKLI* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2856 208 Coils Coil 134 161 - -
Ahy17g2856 208 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 13 208 IPR015720 -
Ahy17g2856 208 Pfam emp24/gp25L/p24 family/GOLD 22 203 IPR009038 -
Ahy17g2856 208 SMART EMP24_GP25L_2 20 203 IPR009038 -
Ahy17g2856 208 ProSiteProfiles GOLD domain profile. 30 143 IPR009038 -
Ahy17g2856 208 PANTHER EMP24/GP25L/P24 FAMILY PROTEIN 13 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2856 Ahy-Chr17 127770104 127772002 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2856 K20352 - gmx:100500676 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2856 17 127770104 127772002 Ahy17g2856 17 127770104 127772002 ECH
Ahy17g2856 17 127770104 127772002 Ahy8g0568 8 11186431 11188181 hybridization