Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2840 ATGCCTTCTGCTCCTTCAAAGCTCTATTCAGATGACGTCAGCCTCCTCGTCGTGACGCTAGACACCAACCCTTTCTTCTGGTCCACTTTCTCCTTCCCTTTCTCCGAGTTCCTCTCTCATGTGCTTGCGTTTCTCAACTCGATCCTGCTTCTTAGTCAGCTCAATCAGGTTGTGGTTATCGCCACTGGCTGCAATTCCTGCACCTACCTCTACGATTCTTCTTCCGATAAGAACCATGGCTCCACCACCGGTTCCATGCCCTCCCTCTACTCCGATTTGCTGCACAATCTCGAGGTTTTCCTAGCTAAGGACCAGCATTTGGCAAAGCCCAGGGATAATGCTGCAGGTGGAGGAGCTCCTCCTCCTTCGCTCCTTTCGGGATCCTTGTCCATGGCGCTTTGTTATATACAGAGAGCTTTTCGTTCGGGACCCATTCATCCTCAGCCTCGGATTTTGTGCTTACAAGGATCTGCTGATGGACCAGAACAGTATGTGGCAATCATGAATTCAATATTCTCTGCGCAGCACTCAACAGTCCCTATAGATTCTTGTTATATTGGTTCTAACAATTCTGCATTCCTCCAACAGGCTTCGTACATAACCGGTGGCATATATTACAGGCCTCCCCATTTGGATGGGCTTTTCCAATATTTTTCAACGGTGTTTGCAACTGATTTGCATTCTCGTGCCTTTTTGCGGCTTCCTAAATCTGTGGGTGTGGATTTTCGTGCATCGTGCTTCTGTCATAAGCAAACAATTGACATGGGCTATGTATGCTCTGTATGCTTATCCATATTCTGTGAGCATCATGATAAATGTTCCACTTGTGGGTCTGTATTTGGCCAGGCTCAATCAAATGTTCCCTCATCTACTGACCGGAAAAGAAAAGCTTGA 894 0.4709 MPSAPSKLYSDDVSLLVVTLDTNPFFWSTFSFPFSEFLSHVLAFLNSILLLSQLNQVVVIATGCNSCTYLYDSSSDKNHGSTTGSMPSLYSDLLHNLEVFLAKDQHLAKPRDNAAGGGAPPPSLLSGSLSMALCYIQRAFRSGPIHPQPRILCLQGSADGPEQYVAIMNSIFSAQHSTVPIDSCYIGSNNSAFLQQASYITGGIYYRPPHLDGLFQYFSTVFATDLHSRAFLRLPKSVGVDFRASCFCHKQTIDMGYVCSVCLSIFCEHHDKCSTCGSVFGQAQSNVPSSTDRKRKA* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2840 297 Pfam Transcription factor Tfb4 13 277 IPR004600 GO:0000439|GO:0006289|GO:0006355
Ahy17g2840 297 Gene3D von Willebrand factor, type A domain 10 225 IPR036465 -
Ahy17g2840 297 PANTHER TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED 1 286 IPR004600 GO:0000439|GO:0006289|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2840 Ahy-Chr17 127351571 127355167 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2840 K03143 - gmx:100810574 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2840 17 127351571 127355167 Ahy17g2840 17 127351571 127355167 ECH
Ahy17g2840 17 127351571 127355167 Ahy8g0559 8 10982402 10986105 hybridization