Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2830 ATGATGGCTCAAACCATGTTGCTCATGTCTAGTGTCTCAACTACTTACTCCATGGATTTGAAGAAAGACACTTTGCTTCAACTTCAGAATCAAAGATTGAGGCCTAAATTCTCTCATCTCCCATTCAACCCAATTCCTTCTAATTCTCTCTCTTTTTCACCTCCTACATTCACAACTCTGGCACTCTTCAAATCCAAGACCAAAGCCCCTCCTAAGGTTGTAAAGCCAAAGCCAAAGGTTGAAGATGGTATATTTGGAACTTCTGGAGGCTTTGGTTTTACTAAGCAGAACGAGCTCTTTGTTGGTCGTGTTGCCATGATTGGTTTTGCTGCATCAATTTTAGGAGAAGCAATTACTGGTAAAGGAATTTTAGCACAATTGAACTTGGAAACAGGGGTTCCAATTTATGAAGCTGAGCCTCTTCTCCTTTTCTTCATCCTTTTCACACTGCTTGGAGCCATTGGAGCACTTGGTGACCGTGGTAAATTCGTTGATGATGATGAACCTAACACTGGAGGTGTCATTCCTCCAGGCAAAGGCTTCAGATCAGCTCTTGGTCTCAAAGAAGGAGGTCCTTTGTTTGGATTCACCAAAGCAAACGAACTATTTGTTGGAAGATTGGCTCAATTGGGATTTGCATTCTCTTTAATTGGAGAGATTATTACAGGGAAAGGAGCACTAGCACAACTCAACATTGAGACAGGGGTACCCATCAATGAAATTGAACCCCTTGTGTTGTTCAATGTTGCTTTCTTCTTCATTGCTGCTCTCAATCCTGGAACTGGTAAATTTGTCACAGATGAAGAGGAAGACTAG 816 0.4179 MMAQTMLLMSSVSTTYSMDLKKDTLLQLQNQRLRPKFSHLPFNPIPSNSLSFSPPTFTTLALFKSKTKAPPKVVKPKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASILGEAITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDDEPNTGGVIPPGKGFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVAFFFIAALNPGTGKFVTDEEED* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2830 271 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 2 182 - -
Ahy17g2830 271 PANTHER PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC 2 182 - -
Ahy17g2830 271 Gene3D Chlorophyll a/b binding protein domain 136 242 - -
Ahy17g2830 271 Gene3D Chlorophyll a/b binding protein domain 50 135 - -
Ahy17g2830 271 Pfam Chlorophyll A-B binding protein 89 216 IPR022796 -
Ahy17g2830 271 SUPERFAMILY Chlorophyll a-b binding protein 69 250 - -
Ahy17g2830 271 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 194 257 - -
Ahy17g2830 271 PANTHER PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC 194 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2830 Ahy-Chr17 127206492 127209434 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2830 K03542 - gmx:100807355 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2830 17 127206492 127209434 Ahy17g2830 17 127206492 127209434 ECH
Ahy17g2830 17 127206492 127209434 Ahy8g0549 8 10837514 10840047 hybridization