Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2828 ATGAATTCCATGCAAACTGAATTTTCAGGGTCTGATTCTGACAGGAACTCGGATGAACTGAACCAATCCCCTGATATCACATCAGAAGACGTGGCGAGTGCTGAAGATGTCGACGAAATTGTGCGTTCACTTGAAGTCACCTCAAATTTAAGGCACAATGTAAAATATAGTGCATTGGAGAAAGATCAAAATGAAGCAAATGATGATGCAACGAATATAAATGACAGAGATTTAACTTATGGTTTGAGGAACATCTCAGAGAAGCTATCTGCAGCACTTGTGAATGTAAGTGGCAAAGAAGACTTGGTTAATTTACATGCTGAAGTTGCTGAAGAAGCCATTGCAGGTTGGGAGAAGGCTGAAAAAGAAGTTGCAGGCTTAAAGAAGCAACTCGAGGCGCTAAGTCTCAGAAATTCGGCTTTGGACGATAGAGTTGCGCATTTAGACGCGGCACTTAAGGAGTGTGTTAGGCAGCTAAGACAAGTAAGAGAAGAGAAGGAACAGAATTTCCATGATGCTGTAGAAAACAAAACAAGGGACTTAGAATCTGCGAAAATTGAACTCCAGAGCAAGCTCATTGAGCTCCAAAGTAAATTGGAAGCTTCTAATGCTAGATCTCAATCAATTGATCTTGAGATGTTACATAAGATTGAAATTTTGGAGAAAGAGAATATGAAACTGAAGCATGAACTCCAAGCTCAATCAGAGGAGCTTGAAATAAGGACAATAGAGAGGGATTTAAGCACGCAAGCGGCTGAGATAGCTAGCAAGCAACATTTAGAAAGCATCAGCAAAGTGGCAAAGCTTGAGGCCAAATGCCGGAGACTGAAGAGCACAGCTTGTAAAGGCTCGGCAGTTAGTGATCATAAATCAATTACATCATCCTCATTTTGTGTTGAATCTCTCACAGATAGTCAATCAGACAACGGGGAGAGGCTGAATGCGGCTGAGATTGATGCCTGCAGGAAGAGTGGCTCAGAAACAGACAAGTGTGAGCCGAGTTCTGATTCATGGGCGGCTGCGCTAATTGCAGAGCTTGATCAGTTCAAGAATGACAAGTGTGGACAAATTCCATCCAGTGCTATTAAAATTGATCTCATGGACGATTTTCTTGAAATGGAACGATTTGCTGCAATGCCTGAGATTACAACTGAAAACTTTAACCAGGAGTCAGTTGTTACTGATCAAAGTACTAACGGAGAAATCTCCCTTGCAGATGAGTTTGACACGATGAACCGTCAGATGAAAGAACTAAAAGAGAAGCTAGATAAGGCGAATGTAGATAAATCTGAGCTGGAGATAGCTTTGATGAAATGCCAAGAGCAGTTCGAGGCCTCGCAACTTCGGCTAAGAGAGGCAGACACAAAATTGAAGGAGCTGCAAAGAGAGCTAGAAAATGCCAACGAATCAGAGCAAATGATAGAAAACCAACTAGCGAGCATGGAAGCCGAGGCACAATCAATAACCAAAAGAGTTCAGTTATTAGAAGCTGAGGTTGATAGAGAACAGGCAATGTCAGATGAAATCACAATCAAGTGTAAGGTACTGGAGGAAGAGCTAGAAAGCAAGAAGCAAAATGAGAAATTGTTGTTCAGTGACTTGAAGATCAAACAGGAGGATCTAGCACTGGCTGCAGGGAAGCTTGCTGATTGCCAACAAACAATAGCAGCTTTGGGAAATCAACTAAATTGCTTAGCAGCACTTGAAAATTTCAAGTTGTATTCAAATGACACATAA 1737 0.4157 MNSMQTEFSGSDSDRNSDELNQSPDITSEDVASAEDVDEIVRSLEVTSNLRHNVKYSALEKDQNEANDDATNINDRDLTYGLRNISEKLSAALVNVSGKEDLVNLHAEVAEEAIAGWEKAEKEVAGLKKQLEALSLRNSALDDRVAHLDAALKECVRQLRQVREEKEQNFHDAVENKTRDLESAKIELQSKLIELQSKLEASNARSQSIDLEMLHKIEILEKENMKLKHELQAQSEELEIRTIERDLSTQAAEIASKQHLESISKVAKLEAKCRRLKSTACKGSAVSDHKSITSSSFCVESLTDSQSDNGERLNAAEIDACRKSGSETDKCEPSSDSWAAALIAELDQFKNDKCGQIPSSAIKIDLMDDFLEMERFAAMPEITTENFNQESVVTDQSTNGEISLADEFDTMNRQMKELKEKLDKANVDKSELEIALMKCQEQFEASQLRLREADTKLKELQRELENANESEQMIENQLASMEAEAQSITKRVQLLEAEVDREQAMSDEITIKCKVLEEELESKKQNEKLLFSDLKIKQEDLALAAGKLADCQQTIAALGNQLNCLAALENFKLYSNDT* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2828 578 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 466 572 - -
Ahy17g2828 578 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 10 472 - -
Ahy17g2828 578 Coils Coil 401 526 - -
Ahy17g2828 578 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 10 472 - -
Ahy17g2828 578 Coils Coil 56 76 - -
Ahy17g2828 578 Pfam Filament-like plant protein, long coiled-coil 99 206 IPR008587 -
Ahy17g2828 578 Pfam Filament-like plant protein, long coiled-coil 213 278 IPR008587 -
Ahy17g2828 578 Pfam Filament-like plant protein, long coiled-coil 396 567 IPR008587 -
Ahy17g2828 578 Pfam Filament-like plant protein, long coiled-coil 322 392 IPR008587 -
Ahy17g2828 578 Coils Coil 117 205 - -
Ahy17g2828 578 Coils Coil 217 237 - -
Ahy17g2828 578 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 466 572 - -
Ahy17g2828 578 SUPERFAMILY Tropomyosin 406 555 - -
Ahy17g2828 578 MobiDBLite consensus disorder prediction 1 34 - -
Ahy17g2828 578 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2828 Ahy-Chr17 127155474 127158676 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2828 - - aprc:113852503 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2828 17 127155474 127158676 Ahy17g2828 17 127155474 127158676 ECH
Ahy17g2828 17 127155474 127158676 Ahy8g0547 8 10813328 10816481 hybridization