Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2827 ATGGGTAGAGAAGAAGGAGGACGAGAGCGCGGGAAGGTTGAGAATTTCTTCTTAGGGACTCTCATTTTGTGGGCCCTATCCGTTTGTTTTCAGATACTATTCAATAACCGCAGCCAGCTTCTCTACGTCGTTGCCGGTACTGTATTCTACCAGGGCTGTAATTCCCTCATCCGAATATTCTTTTGCAAACAAACGCACAAAGACAGAGACGCTCTCTTCGTCAACACCTCCGTCTCCCTTCTCCATTCTACCATCACCTCCGCTTCAGTGGTCTTTATTTTGCTCAGACAGGTGCTAATTAACGGTCCGAGTGGAATGTTCGATCACTCGCAGTTGGTAGAACATACATGGCCATGGGCATTTGAAGCATTGTGCTTTTCATGTGGTTACTTTGCATATGATCAATGGGATATGCTTTGCTACCACTTGTACAATGGTTGGATCCCTTCCATCCTTGTGCATCATCTGGTTCTCCTAATTTGCTTCACTCTTGCTTTGTATCGAAATATCACCATCAACTACCTCATTCTCACTTTAGTTTGCGAGCTGCATTCAATCTTTCTGCACGTGAGGAAAGTGAGACGGATGTCCGGTGTACGCGAAGCAAAGGCCAATTTTGTTAAGCTAGAATGGTTTCTTAATTGGTTGACATTCTTTCTGGCAAGGACTATACCTCACATTCTCATCATGGTCAAGCTCATCCGGGATGCTCACAAATTTGGAAGGGGAATGGAGCTACCACTGGCTCTGTTTGGCATGGCTGGTATGAATGTGTTGAATATTGGTCTTGGCCTTGATCTCATTAAAGCTTTTAATAGAGAGAGCAAGTCACACCAGACTAAGCAGCATCACCATAGTGAATGA 864 0.4468 MGREEGGRERGKVENFFLGTLILWALSVCFQILFNNRSQLLYVVAGTVFYQGCNSLIRIFFCKQTHKDRDALFVNTSVSLLHSTITSASVVFILLRQVLINGPSGMFDHSQLVEHTWPWAFEALCFSCGYFAYDQWDMLCYHLYNGWIPSILVHHLVLLICFTLALYRNITINYLILTLVCELHSIFLHVRKVRRMSGVREAKANFVKLEWFLNWLTFFLARTIPHILIMVKLIRDAHKFGRGMELPLALFGMAGMNVLNIGLGLDLIKAFNRESKSHQTKQHHHSE* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2827 287 PANTHER CT120 PROTEIN 16 284 - -
Ahy17g2827 287 SMART lag1_27 68 273 IPR006634 GO:0016021
Ahy17g2827 287 ProSiteProfiles TLC domain profile. 68 285 IPR006634 GO:0016021
Ahy17g2827 287 Pfam TLC domain 73 260 IPR006634 GO:0016021
Ahy17g2827 287 PANTHER TLC DOMAIN-CONTAINING PROTEIN FLD-1 16 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2827 Ahy-Chr17 127153653 127155310 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2827 - - gmx:100806828 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2827 17 127153653 127155310 Ahy17g2827 17 127153653 127155310 ECH
Ahy17g2827 17 127153653 127155310 Ahy8g0546 8 10811542 10813230 hybridization