Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2819 ATGGATGTGAAAGGAACAAGTGGGGTTGTTCCATTGAGGAAGGTGTTGTTTCTGGTTCTAATCCTTTGTGCAATTTTCTCAGTTTCTTTGTCAAAAGTGAATGATACAAATGATCAGATTCTCAACGCCAAGAAGCCACAACCAAAACCCGCAGCTCCTTCTAGATCATCTGGTCACACTTTTCATTTCGCCATTCAAGGGAATGTCTATCCTCTTGGATATTATACGGTGAAAGTGGCAATTGGAAATCCACCTCAATTATACGACCTTGACATTGACTCTGGTAGTGATCTCACTTGGGTTCAGTCCAAATCCTGTAAGACCTGCACACCTCGTTCACAATATTATCCGTATAACCCCAACAGTAACATCCAATGCAAAGAACCCCTGTGTGCTGCGCTAAATAGAAACTGCGCTCCACCAACTGGGCCATGTAAATATAAAATCGAGTATGCAGACAATGAATTTTGTTCAGGGGTGCTTGTTAGGGACTTTATTTCCTTTAGATTAGACGATGGCTCTATTCTACATCCTCAACTTGGCTTCGGGAGTGGATTTGATCAAACACCTTCTAATCATCATCATTCCTCGCATATCAAAACGGCGGGGGTGTTTGGCCTTGGCAATGGCAAGACAAGCATTTTGTCTCAGCTTTCTTCTCTGGGCTACATTCACAATGTCTTTGGCCATTGCTTGAGTTCCAAAGGAGGAGGTCGTTTATTCCTTGGTGATGATATTAAAACCTCCAAGACTCTTGTTTGGACACCTATCTTGCGCAGTTCCTCCTCCTCCAATATAGAACACTACAGGGCAGGCCCTGTAGATTTATTGTTCAATGGGAAGCAAGCTGTTAATGGTCTTGAAGTTATTTTTGACAGTGGAAGCACATACACATACCTCAATAAAAAAGCTTATAATGTGTTGTTTGGTCTGATAAATAATGACTTAGGAAATAAGGTGCAGAGAGCTACTGAGGACACAACACTGGTAATATGTTGGAAGGGTCAAAATCTTTTTGGATATTTCAAAAACATAGTACTGAACTTCCCAAAAACAAAATCTCAGTTCGTACTAACACCACAATCTTATCTCATTGTCTCGGAACGTCATAATACATGCTTAGGGATTTTAGATGGCTCAGAAGAACTTGGAGATATTAACATAATTGGAGACGTCTCTTTTCAAGATAAGCTAGTGGTTTATGACAACGAGAAGATGCAGATTGGATGGGTTCCTGACAATTGTGCTACGTCTTCATTTACAAATGCCAAATCATTACGAGTTCATCACAGAGGAAATATTTTGTCCTAA 1311 0.405 MDVKGTSGVVPLRKVLFLVLILCAIFSVSLSKVNDTNDQILNAKKPQPKPAAPSRSSGHTFHFAIQGNVYPLGYYTVKVAIGNPPQLYDLDIDSGSDLTWVQSKSCKTCTPRSQYYPYNPNSNIQCKEPLCAALNRNCAPPTGPCKYKIEYADNEFCSGVLVRDFISFRLDDGSILHPQLGFGSGFDQTPSNHHHSSHIKTAGVFGLGNGKTSILSQLSSLGYIHNVFGHCLSSKGGGRLFLGDDIKTSKTLVWTPILRSSSSSNIEHYRAGPVDLLFNGKQAVNGLEVIFDSGSTYTYLNKKAYNVLFGLINNDLGNKVQRATEDTTLVICWKGQNLFGYFKNIVLNFPKTKSQFVLTPQSYLIVSERHNTCLGILDGSEELGDINIIGDVSFQDKLVVYDNEKMQIGWVPDNCATSSFTNAKSLRVHHRGNILS* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2819 436 Pfam Xylanase inhibitor C-terminal 288 410 IPR032799 -
Ahy17g2819 436 PRINTS Pepsin (A1) aspartic protease family signature 387 402 IPR001461 GO:0004190|GO:0006508
Ahy17g2819 436 PRINTS Pepsin (A1) aspartic protease family signature 81 101 IPR001461 GO:0004190|GO:0006508
Ahy17g2819 436 PRINTS Pepsin (A1) aspartic protease family signature 289 300 IPR001461 GO:0004190|GO:0006508
Ahy17g2819 436 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 14 417 - -
Ahy17g2819 436 SUPERFAMILY Acid proteases 68 416 IPR021109 -
Ahy17g2819 436 ProSiteProfiles Peptidase family A1 domain profile. 75 411 IPR033121 -
Ahy17g2819 436 Gene3D Acid Proteases 50 242 IPR021109 -
Ahy17g2819 436 Gene3D Acid Proteases 243 423 IPR021109 -
Ahy17g2819 436 PANTHER ASPARTYL PROTEASES 14 417 IPR001461 GO:0004190|GO:0006508
Ahy17g2819 436 Pfam Xylanase inhibitor N-terminal 75 244 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2819 Ahy-Chr17 127031480 127035327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2819 55 415 Miscellaneous Gene Families AT1G44130 46.719 5.39e-106 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2819 - - gmx:100783194 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2819 17 127031480 127035327 Ahy8g0541 8 10725447 10729054 hybridization