Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2803 ATGGCCTCAAGTTCAGATTTTGCGTTATCAGTTCCTTCTGAACTTGAGTCAGTTTTGAGGTTGAGGACTGTTGATTACTTTATTACGAGGAGGCCATGGCTTGATCTTTATGGAGTTAATGTGAGACCTGTGGCGCCATTTGGAAGTGCAAGTAGAAAGCCTTATGTGGAATCTGCACTCATTCATCAATGCTTACCAGATGAGCTGCTTTTTGAGGTCTTTGCTCGAATGACTCCATATGACTTGGGAAAGGCATCTTGTGTGTGTCGAAAATGGAGGTACACAATTCGTAACCCTGTTTTTTGGCGCGTTGCATGCTTGAAGGCTTGGCAGCTCTCTGGAGTGGTAGAAAACTATAGGATTCTTCAATCAAAATATGATGGCTCATGGCGTAAAATGTGGCTCTCACGACCAAGGTTGCGAACTGATGGTATTTATGTGAGTAGAAATACCTACATTCGAGCCGGAGTTGCAGAGTGGAAAATTACTAATCCAGTTCATCTGGTCTGCTATTTCCGGTACATGAGATTTTTCCCTTCTGGACGATTTCTTTATAAGAATTCTTCTCAAAAGATCAAGGATGTGGTGAAGTTCATGAACTTTCGATCATCTAAAGTAGACTCTGTTTTTGGTGGCCACTACACATTGTCAGATGACAAGGTTGAAGCTGCTGTCTTGTATCCAGGCATGCGACCTACTGTCTTGAGAATTCGCTTGAGAGTTAGAGGAACAACTCCAGGGGCCAACAATCGGATGGATTTGATTTCACTTGTCACCAGTGGTGTGAACAATAGTGAGGCAAGTGCACCCGAGGAGGACATTCTTGGTGTAGTTGAAGGATGGCGGGATGATGAAACACACAACCCAGATGTGCCTGCAGTCTCACATAAGAGGGGCATGACTCCTTTTGTCTTTGTTCCATTTGACCAGGTGGAGACATCAGTGTTCAATCTTCCTGTGGAAAAAATGGATTATTATGTACCTGGTTGA 990 0.4364 MASSSDFALSVPSELESVLRLRTVDYFITRRPWLDLYGVNVRPVAPFGSASRKPYVESALIHQCLPDELLFEVFARMTPYDLGKASCVCRKWRYTIRNPVFWRVACLKAWQLSGVVENYRILQSKYDGSWRKMWLSRPRLRTDGIYVSRNTYIRAGVAEWKITNPVHLVCYFRYMRFFPSGRFLYKNSSQKIKDVVKFMNFRSSKVDSVFGGHYTLSDDKVEAAVLYPGMRPTVLRIRLRVRGTTPGANNRMDLISLVTSGVNNSEASAPEEDILGVVEGWRDDETHNPDVPAVSHKRGMTPFVFVPFDQVETSVFNLPVEKMDYYVPG* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2803 329 ProSiteProfiles F-box domain profile. 59 105 IPR001810 GO:0005515
Ahy17g2803 329 Gene3D - 49 143 - -
Ahy17g2803 329 Pfam F-box domain 64 103 IPR001810 GO:0005515
Ahy17g2803 329 SMART fbox_2 65 105 IPR001810 GO:0005515
Ahy17g2803 329 PANTHER F-BOX ONLY PROTEIN 48-RELATED 14 313 IPR045118 GO:0019005|GO:0031146
Ahy17g2803 329 PANTHER F-BOX ONLY PROTEIN 9 14 313 - -
Ahy17g2803 329 Pfam F-box only protein C-terminal region 119 329 IPR045464 -
Ahy17g2803 329 SUPERFAMILY F-box domain 62 141 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2803 Ahy-Chr17 126638037 126642228 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2803 K10295 - gmx:100800263 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2803 17 126638037 126642228 Ahy8g0525 8 10392808 10397129 hybridization