Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2798 ATGCCAGCTTCTTCTCCTTCAGAGAACCGCACAAAATGGAGGAAGCGGAAGAGGGAATCGCAAATCAGTCGCCGCCACCAGAAGCACCAGCACCACCACGAAGACGACGACGACGAAGAAGAAGAGAACCCCAATGCCGACAACAACGAAGACCACGACGACGATTCTGAGGACCAAACCCCTAATCCCCAATCTGCTTCCCCTCACCACCACGAGATCGAGGTGCTCTCCGATCACGCCGTCCAGATTTCGCATTTCCCCACTGTTCTCAAGCGCTCCGTTAACCGCCCACACTCCTCCGTCGCCACCGTCATCGCTCTCGAGCGCGCCGCACTCGCCGGCGACTCCAAGGCCCACCAACAGCTCCACAACAGCGGCAGCATTCCGTTCCTCGAGAATGTCTCTCACGGCCAGCTCCAGGCCCTCTCCACCGTCCCGGCTGACAGCCCCTCCCTCGATCATGACCGCGACGGCGGCAGCAGCAGCTCCTCTTTTGTTATCACTCCTCCGCCAGTTTTGGAAGGACGTGGTGTTGTTAAGCGCTTTGGAAATAGGGTTCTTGTTGTTCCAATGCATTCAGATTGGTTTTCACCAGCCACAGTGCATCGACTAGAGAGACAAGCAGTGCCGCATTTCTTTTCTGGAAAATCACCAGGTCATAGTCCGGAGAAGTATATGGAGTGCAGGAACTATATTGTTGGGCTCTACATGGAGGACCCTGGGAAGAGGATTACTGTCTCTGATTGTCAGGGATTGTTGGTTGCAGTTGACAAAGAAGATTTAGCTCGGATTGTCCGGTTCCTTGATCATTGGGGAATCATCAATTACTGTGCTTTGGAGTCATGTCATGCGCCATTTAATGATGCATCCTTCCTGAAGGAGGAGACAAGTGGAGAAGTCCGCGTGCCCTCAGAGTTTCTAAAATCCATAGATAGTCTGATAAGTTTTGACAAGCCCAAGTGTAAGGTCAAAGCAGAAGAAATTTATTCATCATTCACAATGCACAATGCTGATGTCACTGATCTGGACAACAGGATACGGGAACATCTATCCGAAAATCATTGCCATTGTTGTTCTCGTCCTCTTCCTGCTGTATACTATCAGTCACAAAAAGAGGTTGATATTTTACTTTGTACTGGCTGCTTTCATGATGGGAGATTTGTCGTTGGACATTCAAGTATAGATTTTGTAAGGGTGGATTCATCCAGGGATTATGGTGAGGGAGATGGGGATAGTTGGACTGATCAAGAAACTTTGTTGCTGCTTGAAGCAATGGAGATTTACAATGAGAATTGGAATGAAATTGCCGAACATGTTGGGACCAAGTCAAAAGCACAATGCATTCTTCATTTTCTTCGTCTACCAATGGAAGATGGAAAATTGGAAAATATCAACATTCCAAGCGTGTCTTTGCCATCCAATGTGATGAATAGAAATGATAGTGGAAGAATGCATGGCTACGTAAACGGAGATTCTGCAGGAACTGTCCGCCAAAGCAGAGATTCTGACAGCAGGTTTCCTTTTGCCAATTCTGGAAATCCTGTTATGGCTTTGGTAGCCTTTTTAGCCTCTGCCGTTGGACCAAGAGTAGCTGCTGCTTGTGCTCATGCAGCATTAGCAGTATTATCAGAGGATACTTCTGGCAGCACATCGCAAATGGAAGTACAAGGACATGATAATAGGTCAAATTCAGAAAGTGCACATAGTAGAGATCGTGGAGAAACTGCAATTTCAAATAATCATAATGAGGATAAGGCAAAACTTGTTGGTTCACGAGGTCAAAATGAAGGCGGGACAACACCACTATCTGTTGAGAAAGTTCAAGATGCAGCAAAGGCAGGCCTCTCTGCTGCAGCCATGAAATCTAAATTGTTTGCTGATCATGAAGAACGAGAAATCCAGAGGCTATGTGCTAGTATCGTTAGTCATCAGTTGAAAAGATTGGAATTGAAGCTGAAGCAGTTTGCTGAAATTGAAACATTATTGATGAAAGAATGTGAACAAGTTGAGAGGACAAGGCAGAGATTTGCTGCTGAGCGGTCCCGTATTATATCTGCTCGTCTTGGAACTGGAGGAGCCACACCTCCACCGTCAGGTGTTGGTCCTTCCATGTCTAACAGTAATGGCAACAGTAGGCCACAAATGATCTCTGCGTCTCCCTCGCAGCCCAGCATCTCGGGGTATGGCAACAACCAACCAGTTCATCCACACATGTCCTTTGCCCCGAGACCTTCTATGTTTGGTTTGGGACAAAGACTGCCCCTATCTATGATACAACAATCTCAATCACCTCCAAATGCCATGTTCAATGCCCCTAGTAATGTGCAACCCACTTCCAATCATCCATTGTTGAGGCCTGTATCAGGGACTAACTCTGGTTTAGGTTAA 2388 0.4711 MPASSPSENRTKWRKRKRESQISRRHQKHQHHHEDDDDEEEENPNADNNEDHDDDSEDQTPNPQSASPHHHEIEVLSDHAVQISHFPTVLKRSVNRPHSSVATVIALERAALAGDSKAHQQLHNSGSIPFLENVSHGQLQALSTVPADSPSLDHDRDGGSSSSSFVITPPPVLEGRGVVKRFGNRVLVVPMHSDWFSPATVHRLERQAVPHFFSGKSPGHSPEKYMECRNYIVGLYMEDPGKRITVSDCQGLLVAVDKEDLARIVRFLDHWGIINYCALESCHAPFNDASFLKEETSGEVRVPSEFLKSIDSLISFDKPKCKVKAEEIYSSFTMHNADVTDLDNRIREHLSENHCHCCSRPLPAVYYQSQKEVDILLCTGCFHDGRFVVGHSSIDFVRVDSSRDYGEGDGDSWTDQETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPMEDGKLENINIPSVSLPSNVMNRNDSGRMHGYVNGDSAGTVRQSRDSDSRFPFANSGNPVMALVAFLASAVGPRVAAACAHAALAVLSEDTSGSTSQMEVQGHDNRSNSESAHSRDRGETAISNNHNEDKAKLVGSRGQNEGGTTPLSVEKVQDAAKAGLSAAAMKSKLFADHEEREIQRLCASIVSHQLKRLELKLKQFAEIETLLMKECEQVERTRQRFAAERSRIISARLGTGGATPPPSGVGPSMSNSNGNSRPQMISASPSQPSISGYGNNQPVHPHMSFAPRPSMFGLGQRLPLSMIQQSQSPPNAMFNAPSNVQPTSNHPLLRPVSGTNSGLG* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2798 795 MobiDBLite consensus disorder prediction 545 602 - -
Ahy17g2798 795 Gene3D - 193 279 IPR036388 -
Ahy17g2798 795 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3C 63 794 - -
Ahy17g2798 795 ProSiteProfiles Myb-like domain profile. 412 455 IPR001005 -
Ahy17g2798 795 CDD SANT 412 454 IPR001005 -
Ahy17g2798 795 Pfam SWIRM-associated region 1 613 688 IPR032451 -
Ahy17g2798 795 MobiDBLite consensus disorder prediction 1 70 - -
Ahy17g2798 795 MobiDBLite consensus disorder prediction 561 590 - -
Ahy17g2798 795 Pfam SWIRM domain 190 276 IPR007526 GO:0005515
Ahy17g2798 795 Pfam Myb-like DNA-binding domain 412 454 IPR001005 -
Ahy17g2798 795 ProSiteProfiles Zinc finger ZZ-type profile. 349 404 IPR000433 GO:0008270
Ahy17g2798 795 SMART sant 409 457 IPR001005 -
Ahy17g2798 795 Gene3D - 409 459 - -
Ahy17g2798 795 ProSiteProfiles SWIRM domain profile. 187 285 IPR007526 GO:0005515
Ahy17g2798 795 PANTHER SWI/SNF COMPLEX-RELATED 63 794 - -
Ahy17g2798 795 MobiDBLite consensus disorder prediction 37 57 - -
Ahy17g2798 795 SUPERFAMILY Homeodomain-like 186 282 IPR009057 -
Ahy17g2798 795 MobiDBLite consensus disorder prediction 688 737 - -
Ahy17g2798 795 SUPERFAMILY Homeodomain-like 410 463 IPR009057 -
Ahy17g2798 795 MobiDBLite consensus disorder prediction 145 166 - -
Ahy17g2798 795 MobiDBLite consensus disorder prediction 760 795 - -
Ahy17g2798 795 ProSiteProfiles SANT domain profile. 408 459 IPR017884 -
Ahy17g2798 795 MobiDBLite consensus disorder prediction 699 733 - -
Ahy17g2798 795 MobiDBLite consensus disorder prediction 545 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2798 Ahy-Chr17 126561113 126565857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2798 355 451 EF-hand Containing Proteins AT3G07740 32.075 2.20e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2798 K11649 - gmx:100780440 1167.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2798 17 126561113 126565857 Ahy17g2798 17 126561113 126565857 ECH
Ahy17g2798 17 126561113 126565857 Ahy8g0519 8 10272899 10277719 hybridization