LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy17g2785	ATGGTGGCATGTCTCTGCACGTGCCACCTCGTTTACACCGCGATGAATCTTTCCGCCTCCGCCGCCGTAGCATCCTCACTTTCTCTTCTCTCTTCTTTCTCCTTCCTCAATCCCAATCCCAATTCCAATCCCAAAACTTTCGCTTTCGGCTTCCGGTTCAAGACGAAGGGTAGGAGTACCCGCGGACTGAGGCGTCCCAAGTTTCTCGTCACCGCCCAACTTTCCAACTCCTTTTCCTTCAGTTTCTGGTTGGATTCTCAGAGTTTGAATGCTATCCAATCCCATGATCCGTCACAATTGCCTTGGGTGGGTCCGGTTCCAGGTGATATTGCTGAAGTGGAAGCATACTGTAGGATCTTTAGGAATTATGAAAGGCTTCATTCTTCATTAATGAACGTGTTGTGCAATCCACTAACCGGTGAATGTAGTGTTTCCGATGAAGTGCCATCGGATGAGAGGCTGCCTCTAGAAGATAAGATTGTTTCGGTCCTTGGGTGCATGGTAGCACTTGTGAACACCGCGAGGGAGGATGTTCTTTCTGGAAGAAGGTCTTCGGTTATGACCCCCTTTCGTGTGGCGGGGGTTGGCGTGATGGAGGACGTGGTGCCCCCACTTGCTGCTTTTAGGAGTGAGATGAAGAGGTGTTGTGAGAGCTTGCATGTTGTTCTTGAGAACTATTTAGTTCCAGGTGACAATCCAAGGTTGGATGCGTGGAGGAAACTTCAGAGATTGAAGAATGTATGCTATGATGCTGGTTTTCCGCGCAGGGAGGAAGATCCATGTCCAGAACTGTTTTCGAATTGGAGTCCTGTATATTTATCTGCTCCCAAAGAAGACACAAAATTGAAAGACTCTGAAGCAGGATTTTGGACAGGCGGGCAGGTAACTGAAGAAGGCCTAAAGTGGTTGCTTGATAATGGATATAAAACTATCATAGATCTTAGACAGGAGGTAGTAAAAGATAATTTATATCATGAAGCTGTTAATGATGCTATTTCGTCTGGAAAAATTGAATTGGTCAAAATCCCTGTTGACGTTCAGAGAGCACCTACAATGGAACAGGTTGAGAGGTTTTCATCTTACGTTTCAAATTACAGCAAACGTCCAATCTATCTTCATAGTCAGGAAGGAGTTTGGAGAACGTCTGCCATGGTCTCTAGATGGAGGCAGTATATGACTCGATTTGCATCATCATTTGTTTCTAATGAAGCAGTTACTTCCAGTGAAAGGCCATCAGATTATAAAAATGGATCTGCGAAACCGCATGACTCTTCAATAGAATCTGAGAGATCCAGATCCTCTGCAGAAACAGATGACAATTTGTTGCAAGAGAGTTCGGGTGCAGTTACTCCTAATTCTTCACAAGTGATTACTGGCAGTGAGGACAACTCTTCTATGAATTTCTCCAGCAAAACTATCCCTTTAGAAGCTCAAATCCCTCCTCGTGACATCTTCTCCAAAAGAGAGATGTCCAGATTTTGGAGAAATAGAAAGATCCCAGGACCCTCTTATTTCAATTATAAGGTTGAAAGTTTAGAATGTTTGACAGATTCCAGGAACATGCATGCTGGAAGACCACAGGGGAAAGTGACCATCAGCAATGGAGATAATCCCGTCGCTGAAATTGTGGGCCGGGAAAGTTTGAATGGGTCACCTCGTGTGGACTATCCATCTGGAGAGCCTCCAATCACAGTTGGTGGCGACTGGAAGTCAGTGAATGGGAGTACATCGAGCTTTGTGAAGACAACAGTTAATGAGTTAAGTGAAGGAGATGTGCGCTACATGAATAATGGCAATGTCACAATGACTAAGTCTCAAAGTGATGATGGTAAGGCTGGGTTAGCCTTACATGATGAAGACTTGGGACTCATGGAGGGAGACATGTGTGCATCCTCAACTGGAGTTGTAAGGGTGCAATCAAGAAAGAAAGCAGAGATGTACCTAGTACGGACTGATGGCGTTTCTTGTGAGAGAGAAAAGGTGACTGAATCTTCTTTGGCCTTCACTCACCCTAGCACCCAGCAACAGATGCTTATGTGGAAATCTACACCGAAGACTGTGTTATTGCTGAAAAAGCCCGGGGAGCAACTCATGGAAGAAGCTAAAGAGGTTGCTTCCTTTCTGTATTACCAAGAGAAAATGAACGTTTTTGTGGAACCTGATGTGCATGATATATTTGCTAGACTTCCTGGATTTGAATTTATTCAAACCTTCTATATCCAAGATACTAGTGATCTACATGAGAAAGTAGATTTTGTGGCTTGTTTGGGAGGAGATGGTGTTATTCTGCATGCTTCAAATCTATTTGGAGGTGCTATTCCTCCTGTTGTGTCATTTAACCTTGGTTCCCTTGGTTTTCTGGCTTCTCATTGTTTTGAAGACTACAGGCAGGACTTACGACAAGTCATCCATGGAAATAATACTGGAGATGGTGTATACATAACTCTTAGAATGCGTCTCAGATGTGAAATTTTTCGTAAGGGTAAAGCAATGCCAGGGAAAGTGTTTGATATTCTTAACGAGGTTGTTATTGATCGGGGTTCTAATCCATATCTTTCAAAGATTGAATGTTATGAACATGACAGACTTATAACCAAGGTACAAGGTGATGGAGTCATTGTGGCCACCCCAACGGGAAGCACTGCTTATTCTACAGCTGCTGGAGGTTCCATGGTGCATCCAAATGTTCCTTGCATGCTATTTACCCCGATTTGTCCGCATTCACTCTCATTTAGACCAGTTATACTCCCAGATTCTGCTCGACTAGAATTAAAGATTCCGCAAGACGCAAGAAGCAATGCTTGGGTATCATTTGATGGGAAGAGGAGGCAGCAACTTTCTCGGGGAGATTCTGTACGAATATCCATGAGTCAGCACCCACTTCCAACTGTTAACAAGTTCGATCAAACCGGTGATTGGTTTCACAGCTTGATTCGCTGCCTGAATTGGAACGAAAGACTTGATCAAAAGGCCCTATGA	2979	0.4404	MVACLCTCHLVYTAMNLSASAAVASSLSLLSSFSFLNPNPNSNPKTFAFGFRFKTKGRSTRGLRRPKFLVTAQLSNSFSFSFWLDSQSLNAIQSHDPSQLPWVGPVPGDIAEVEAYCRIFRNYERLHSSLMNVLCNPLTGECSVSDEVPSDERLPLEDKIVSVLGCMVALVNTAREDVLSGRRSSVMTPFRVAGVGVMEDVVPPLAAFRSEMKRCCESLHVVLENYLVPGDNPRLDAWRKLQRLKNVCYDAGFPRREEDPCPELFSNWSPVYLSAPKEDTKLKDSEAGFWTGGQVTEEGLKWLLDNGYKTIIDLRQEVVKDNLYHEAVNDAISSGKIELVKIPVDVQRAPTMEQVERFSSYVSNYSKRPIYLHSQEGVWRTSAMVSRWRQYMTRFASSFVSNEAVTSSERPSDYKNGSAKPHDSSIESERSRSSAETDDNLLQESSGAVTPNSSQVITGSEDNSSMNFSSKTIPLEAQIPPRDIFSKREMSRFWRNRKIPGPSYFNYKVESLECLTDSRNMHAGRPQGKVTISNGDNPVAEIVGRESLNGSPRVDYPSGEPPITVGGDWKSVNGSTSSFVKTTVNELSEGDVRYMNNGNVTMTKSQSDDGKAGLALHDEDLGLMEGDMCASSTGVVRVQSRKKAEMYLVRTDGVSCEREKVTESSLAFTHPSTQQQMLMWKSTPKTVLLLKKPGEQLMEEAKEVASFLYYQEKMNVFVEPDVHDIFARLPGFEFIQTFYIQDTSDLHEKVDFVACLGGDGVILHASNLFGGAIPPVVSFNLGSLGFLASHCFEDYRQDLRQVIHGNNTGDGVYITLRMRLRCEIFRKGKAMPGKVFDILNEVVIDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSARLELKIPQDARSNAWVSFDGKRRQQLSRGDSVRISMSQHPLPTVNKFDQTGDWFHSLIRCLNWNERLDQKAL*	993

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy17g2785	992	Gene3D	Protein tyrosine phosphatase superfamily	278	409	IPR029021	-
	Ahy17g2785	992	PANTHER	NAD KINASE	567	992	-	-
	Ahy17g2785	992	PANTHER	NAD KINASE	52	462	-	-
	Ahy17g2785	992	MobiDBLite	consensus disorder prediction	438	467	-	-
	Ahy17g2785	992	MobiDBLite	consensus disorder prediction	406	467	-	-
	Ahy17g2785	992	Gene3D	-	819	959	IPR017437	GO:0003951\|GO:0019674
	Ahy17g2785	992	Hamap	NAD kinase [nadK].	685	983	IPR002504	GO:0003951\|GO:0006741
	Ahy17g2785	992	MobiDBLite	consensus disorder prediction	415	437	-	-
	Ahy17g2785	992	SUPERFAMILY	NAD kinase/diacylglycerol kinase-like	687	987	IPR016064	-
	Ahy17g2785	992	PANTHER	NAD/NADH KINASE FAMILY PROTEIN	567	992	-	-
	Ahy17g2785	992	PANTHER	NAD/NADH KINASE FAMILY PROTEIN	52	462	-	-
	Ahy17g2785	992	SUPERFAMILY	(Phosphotyrosine protein) phosphatases II	288	391	IPR029021	-
	Ahy17g2785	992	Pfam	ATP-NAD kinase C-terminal domain	839	965	-	-
	Ahy17g2785	992	Pfam	ATP-NAD kinase N-terminal domain	690	805	IPR002504	GO:0003951\|GO:0006741
	Ahy17g2785	992	Gene3D	-	674	984	IPR017438	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy17g2785	Ahy-Chr17	126325184	126330147	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy17g2785	K00858		-	gmx:100820030	1354.73

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy17g2785	17	126325184	126330147	Ahy17g2785	17	126325184	126330147	ECH
	Ahy17g2785	17	126325184	126330147	Ahy8g0505	8	10077711	10082785	hybridization