Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2725 ATGGCTAGAGTTTGTTGGCCATATTTTGATCCTGAGTATGAGAACTTCAGCAACAGAATGAATCCTCCAAGGGTCTCTGTGGACAACACTAGTTGCCATGATTGTACTCTTATCAAGGTTGATAGTGTTAACAAACCTGGAATTCTGCTGGAAGTGGTGCAAATCTTGACAGATCTTGACTTCATAATTACCAAAGCCTACATATCTTCTGATGGAGGATGGTTTATGGATGTGTTTCATGTGACGGATCAACAAGGAAAGAAGATAACAGATAGCAAAACCATTGACTTTGTGGAAAAGGCTCTAGGACCAAAGGGCCAGAGCACAGAAGGGGTGAAGAATTGGCCAAGCAAGCGTGTTGGAGTGCATTCTGTTGGTGATCATACATCGATTGAGCTTATTGGCAGAGACCGGCCAGGTCTCTTGTCCGAGATCTCTGCTGTCCTTGCTAGCCTCCATTTCAATGTGGTTGCAGCTGAGGTTTGGACTCATAATAGAAGAATAGCTTGTGTCCTTTATGTCAGTGACACTACAACCCAGGCTGTGGATCATCCAAATAGATTATGCCTTATGGAGGAGCAGCTTAACAACATTTTGCGCGGCTGCGAGGATGGTGACAAAGTTGCTAGGACTAACTTCTCCATGGGGTTCACCCATATGGATAGAAGGCTGCACCAAATGTTGTTCGCTGATCGCGATTATGAAGGGTCTGGAGCAACAACAGATGCTGATTATTCATCTTCCTCAAGGCCAAAGATCACAATCGAACGCTGCGAGGAAAAAGGATACTCGGTGGTTAGTGTCCGGTGCAAAGATCGGGCCAAACTCATGTTTGACATTGTTTGCACTCTTACTGATATGCAATATGTTGTTTTCCATGCCACAATCTCTTCAGATGCTCCTTATGCATCCCAGGAGTATTTTATTCGGCATATGGATGGATGCACACTTGATACTGAAGGAGAAAAAGAAAGAGTCATCAAATGCATTGAAGCTGCTATTCAGAGAAGAGTGAGTGAGGGTGTGAGCCTTGAACTTTGTGCAAAGGATAGAGTGGGATTGCTGTCTGAAGTAACAAGGATTCTAAGAGAGAATGGATTAACAGTTTGTAGGGCAGGTATATCAACAAGAGGGGAGCAAGCACTGAATGTGTTCTATGTGAGGGACGCATCTGGCAACCCGGTGGATATGAAGACGATGGAAGCGCTTCGCAAAGAGATAGGGAAGACAATGGTGGTGGAAGTGAAAAGAGTACCTGGAAATTCCTCCAGAGCACCAGCTGAAACCAGAGGATGGGGTAAAACAAGCTTCTTCTTTGGAAACTTGTTTGAAAAGTTCTTGGCTTGA 1347 0.4447 MARVCWPYFDPEYENFSNRMNPPRVSVDNTSCHDCTLIKVDSVNKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDFVEKALGPKGQSTEGVKNWPSKRVGVHSVGDHTSIELIGRDRPGLLSEISAVLASLHFNVVAAEVWTHNRRIACVLYVSDTTTQAVDHPNRLCLMEEQLNNILRGCEDGDKVARTNFSMGFTHMDRRLHQMLFADRDYEGSGATTDADYSSSSRPKITIERCEEKGYSVVSVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDAPYASQEYFIRHMDGCTLDTEGEKERVIKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCRAGISTRGEQALNVFYVRDASGNPVDMKTMEALRKEIGKTMVVEVKRVPGNSSRAPAETRGWGKTSFFFGNLFEKFLA* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2725 448 CDD ACT_ACR_4 341 412 - -
Ahy17g2725 448 ProSiteProfiles ACT domain profile. 130 213 IPR002912 -
Ahy17g2725 448 Gene3D - 128 211 - -
Ahy17g2725 448 Pfam ACT domain 129 171 IPR002912 -
Ahy17g2725 448 Pfam ACT domain 37 85 IPR002912 -
Ahy17g2725 448 Gene3D - 338 418 - -
Ahy17g2725 448 SUPERFAMILY ACT-like 339 410 IPR045865 -
Ahy17g2725 448 ProSiteProfiles ACT domain profile. 343 420 IPR002912 -
Ahy17g2725 448 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 4 448 - -
Ahy17g2725 448 SUPERFAMILY ACT-like 125 198 IPR045865 -
Ahy17g2725 448 ProSiteProfiles ACT domain profile. 37 114 IPR002912 -
Ahy17g2725 448 SUPERFAMILY ACT-like 32 106 IPR045865 -
Ahy17g2725 448 CDD ACT_ACR_1 35 106 - -
Ahy17g2725 448 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 448 IPR040217 -
Ahy17g2725 448 CDD ACT_ACR_3 263 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2725 Ahy-Chr17 125293813 125300196 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2725 - - adu:107460610 899.042
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2725 17 125293813 125300196 Ahy17g2725 17 125293813 125300196 ECH
Ahy17g2725 17 125293813 125300196 Ahy8g0471 8 9504747 9510697 hybridization