Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2642 ATGTCAGAAACTCTTCGTATGATTGTTGCTGTTGTTGGAAATGCTGCTTCCGTAGCACTTTATGCTGCACCAACTGTAACCTTCAAGAGGGTGATAAGAAAGAAGAGCACTGAGGATTTCTCATGCATTCCATACATCATAGGACTCTTGAATTGTCTCTTGTTCACATGGTATGGATTGCCAATTGTGAGTTACAAGTGGGAAAATTTCCCTCTTGTTACTGTTAATGGAGTTGGGATTGTTCTTGAGTTCTCCTATGTTGTCATCTATTTCTGGTTTGCTTCTTCTAAGGGAAAGGTGAAGGTGGCAATGGTGACAATACCAGTTCTTATACTGTTCTGCATAGCTGCTGCAGTTTCAGCTTTTGCATTTCATGACACTCATAAAAGAAAGTTGCTTATTGGAAGCATAGGTTTAGGTGTTTCTGTTGCCATGTATGCTTCTCCTCTTGTTGCCATGAAACAAGTCATAAAAACCAAGAGTGTGGAGTTTATGCCTCTACCATTATCTTTGTGCTCTTTCTTGGCTGGTTCACTATGGCTGACTTATGGAGTCATGATTCGCGATGTATTTGTGGCGGGACCAAGTGTGGTTGGAGTGCCATTGGCCATACTCCAATTAGTTCTCCACTGCAAATACCGGAAAAGGAGTGTTTTGGAGGTACCAAACAAGGAGGGAATGGAAGAAAATGGTAACTTTGAGAAAGTGGATTTGGAAAAGGGAAGCTTGGAAATGAATGAAGTGGAAATCAATGTGACAAATCAAAAGAACAATGGAGACAACTTGTGA 789 0.4094 MSETLRMIVAVVGNAASVALYAAPTVTFKRVIRKKSTEDFSCIPYIIGLLNCLLFTWYGLPIVSYKWENFPLVTVNGVGIVLEFSYVVIYFWFASSKGKVKVAMVTIPVLILFCIAAAVSAFAFHDTHKRKLLIGSIGLGVSVAMYASPLVAMKQVIKTKSVEFMPLPLSLCSFLAGSLWLTYGVMIRDVFVAGPSVVGVPLAILQLVLHCKYRKRSVLEVPNKEGMEENGNFEKVDLEKGSLEMNEVEINVTNQKNNGDNL* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2642 262 Pfam Sugar efflux transporter for intercellular exchange 9 97 IPR004316 GO:0016021
Ahy17g2642 262 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016021
Ahy17g2642 262 PANTHER RAG1-ACTIVATING PROTEIN 1 4 257 - -
Ahy17g2642 262 Gene3D - 10 107 - -
Ahy17g2642 262 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 257 - -
Ahy17g2642 262 Gene3D - 132 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2642 Ahy-Chr17 123218255 123219850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2642 1 260 Miscellaneous Gene Families AT5G53190 50.000 1.17e-91 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2642 K15382 - gmx:100813119 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2642 17 123218255 123219850 Ahy17g2642 17 123218255 123219850 ECH
Ahy17g2642 17 123218255 123219850 Ahy8g0410 8 8373804 8375374 hybridization