Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2634 ATGGAGGACGGCGCAGGAAGAGGTTTGGGATGCCAGAAGACTATGGATGGGAAGGCGAGTAACGGGAATGGTGTAGGAAAGGAAATTCCTTCCTGTTGTTTGAAGGCTTTGGCTTCATCCCCTGAGTCTGAGGCAAAGTGTCATTCCACTGTTGTTTCTGGCTGGTTCTCGGCATCTCAGACTCATTCTGGCAAGTCAAGGAAAGTTCAATATTTTAACAATCCAATGTGGCCAGGAGAAGCTCATTCCATCAAAGTTGAGGAGATCCTCTTCAAGGAAAAGTCAGAGTACCAAGAAGTCTTGGTTTTTCAGTCGGCGGCATATGGGAAAGTGCTGGTGCTTGACGGGATTGTTCAGTTGACTGAGAAGGATGAATGCGCTTATCAGGAGATGATTGCTCATCTTCCCCTTTGTTCAATTGAGTCCCCCAAAAATGTTTTAGTTGTTGGTGGAGGAGATGGTGGGGTTCTAAGAGAAGTATCCCGCCACAGCTCTGTTGAACACATTGATATTTGTGAGATAGATAAGATGGTTATTGATGTATCTAGGAAGTATTTTCCGGAGTTAGCCATTGGGTTTGAAGATCCTCGAGTACACCTGCATGTTGGTGATGCTGTTGATTTTCTTAAACGTGCTCCTGAAGGAAAGTATGATGCCATCATTGTTGATTCCTCGGACCCTGTCGGTCCTGCTCAGGAACTTGTAGAGAAACCATTTTTTGATACAATAGCTAAAGCTTTAAGGCCTGGTGGAGTTCTTTGTAATATGGCTGAAAGCATGTGGCTTCATACACACCTTATTCAAGACATGATTTCCATTTGTCAAGAAACATTCAAAGGTTCTGTACACTATGCATGGGCAAGTGTTCCAACATATCCAAGTGGCGTTATAGGCTTTCTTCTGTGCTCGACAAAGGGGCCTCCTGTTGATTTTGTGAAGCCCATCAACCCCATCGAAAAGATAAAAGGTGCTGATAAGCATGGAAGAGAACTTCGGTTCTATAACTCACAGATGCATTCAGCTGCTTTTGCATTGCCCACATTTCTGAAGAGGGAGGTGAGCTTGCTGCGAGATAAGCTTGATCAGTAA 1089 0.4435 MEDGAGRGLGCQKTMDGKASNGNGVGKEIPSCCLKALASSPESEAKCHSTVVSGWFSASQTHSGKSRKVQYFNNPMWPGEAHSIKVEEILFKEKSEYQEVLVFQSAAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIESPKNVLVVGGGDGGVLREVSRHSSVEHIDICEIDKMVIDVSRKYFPELAIGFEDPRVHLHVGDAVDFLKRAPEGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIQDMISICQETFKGSVHYAWASVPTYPSGVIGFLLCSTKGPPVDFVKPINPIEKIKGADKHGRELRFYNSQMHSAAFALPTFLKREVSLLRDKLDQ* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2634 362 Hamap Polyamine aminopropyltransferase [speE]. 54 354 IPR001045 GO:0003824
Ahy17g2634 362 Pfam Spermidine synthase tetramerisation domain 75 122 IPR035246 -
Ahy17g2634 362 Gene3D Vaccinia Virus protein VP39 120 355 IPR029063 -
Ahy17g2634 362 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 53 304 IPR030374 -
Ahy17g2634 362 TIGRFAM speE: spermidine synthase 79 348 IPR001045 GO:0003824
Ahy17g2634 362 ProSitePatterns Polyamine biosynthesis (PABS) domain signature. 146 159 IPR030373 -
Ahy17g2634 362 Pfam Spermine/spermidine synthase domain 125 310 - -
Ahy17g2634 362 PANTHER SPERMIDINE/SPERMINE SYNTHASE 1 359 IPR001045 GO:0003824
Ahy17g2634 362 MobiDBLite consensus disorder prediction 1 22 - -
Ahy17g2634 362 Gene3D Spermidine synthase, tetramerisation domain 46 119 IPR037163 -
Ahy17g2634 362 PANTHER SPERMINE SYNTHASE 1 359 - -
Ahy17g2634 362 PIRSF Spermidine_synth 42 357 IPR030668 GO:0006595
Ahy17g2634 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 71 352 IPR029063 -
Ahy17g2634 362 CDD AdoMet_MTases 167 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2634 Ahy-Chr17 123012002 123016162 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2634 K00797 - gmx:100815244 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2634 17 123012002 123016162 Ahy17g2634 17 123012002 123016162 ECH