Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2604 ATGTCGTCTTCTTCACTTTCGTTCGCAGCGGCTCCGGCTTGGTCTGCGTGCACTCTACCGTCGAATATCGCAAGCAGCAGGACGCAGCTCAATGTGCGAACTGTGGCGAAGGCGAAACCGATGAGCTTCTTCGGTACTCGTTTGCGTTCGAGCTGCAGGTCACTCGGTTCGGAGCGGCTGCACGTGTGGCGGTCGCAGGGGCCAGGGAGGTCGCCGGAGCTGAGGGTGGTGGTCCGGTCGGCATTGTCGGCTGTACCAGAGAAGCCGATGGGGCTTTACGATCCAGCTATGGATAAGGACTCATGCGGAGTGGGGTTCGTAGCGGAGCTGTCCGGCGAGGGCAACCGTAAAACGGTGACAGATGCTTTGGAGATGTTGGTGCGCATGACGCACAGGGGAGCTTGCGGGTGCGAAGCAAACACTGGAGACGGAGCCGGGATTCTTGTGGCTCTACCTCACCAGTTTTACACGGAGGTCGTGGATTTTGAGCTTCCACCTCCTGGAAAATATGCAGTTGGCATGTTTTTCTTGCCCACCTCCGACAGTCGTAGGGAAGAGAGCAAAAATGTATTTAGAAAGGTTGCCGAATCACTGGGCCACTCTGTTCTTGGCTGGCGTTCTGTGCCCACTGATAATACAGGATTGGGCAAATCGGCCCTGCAGACCGAACCAGTGATTGAACAAGTGTTTCTTACGCCAAGCACCAAATCAAAACTTGATTTGGAAAGACAGATGTACATATTAAGGAAGCTTTCAGATGCTGCTATAACATCAGCTTTAGACCTCCATAGTGATGGCATTGCTGATTTTTATACATGTTCACTTTCATCAAGGACTGTTGTTTATAAAGGTCAGTTAACACCAGCTCAGTTGAAGGGTTACTACTTTGCAGACCTTGGCAATGAAAGGTTTACGAGCTACATGGCCCTGATACATTCACGATTCTCAACTAATACTTTTCCTAGTTGGGATCGTGCTCAACCAATGCGAGTTTTGGGCCACAATGGAGAAATCAACACACTTAGAGGCAATGTTAACTGGATGAAGGCACGTGAGGGCCTACTAAAGTGCAAGGAGCTTGGTCTATCCGAGAACGAGTTAAAGAAGCTTTTGCCCATTGTGAATACAACTTCATCTGATTCAGGTGCTTTTGATGGCGTGCTTGAGTTTTTGGTTCAGTCTGGAAAAAGTCTTCCTGAAGCTGTCATGATGATGATCCCTGAAGCATGGCAAAATGACAAGAACATGGATCCCCAGCGTAAAGCATTTTACGAGTATTTCTCGGCTCTCATGGAGCCATGGGATGGGCCTGCTCTTATATCATTTACTGATGGTCACTATCTTGGAGCAACATTGGATAGGAATGGTCTGCGGCCAGGCCGCTTTTATGTCACTCACAGTGGACGAGTTATAATGGCAAGTGAAGTTGGGGTTGTAGACATTCCTCCTGAAGACGTTTGTAGGAAAGGAAGACTAAATCCTGGCATGATGCTTCTAGTAGATTTTGAGAAGCATGCTGTTGTGAATGATGATGCCTTGAAGGAACAGTACTCTTTGTCACGGCCTTATGGGGAGTGGCTAAAAAATCAGAAGATTCAGCTCCAAGACATAGTTGACTCTGTTCATGAATCTGAAAGAGTGCCTCCAAGCATAGCCGGGGTGATTCCAGCATCTGGTGATGATGCAGATATGGAAAATATGGGAATTCATGGTTTACTGACTCCATTGAAAGCTTTTGGCTATACAGTTGAATCCTTGGAGATGTTATTACTTCCCATGGCAAAGGATGGTACAGAAGCCCTTGGTTCAATGGGAAATGATACTCCACTAGCTGTCATGTCTAACCGGGAGAAGCTTACTTTTGAGTACTTCAAGCAAATGTTTGCCCAAGTGACAAACCCACCTATTGATCCTATTCGTGAGAAAATAGTCACTTCCATGGAATGTATGGTTGGTCCAGAAGGTGACCTAACAGAAATTACTGAGGAACAATGCCACCGTCTTTCACTAAAAGGCCCTCTTTTATCCATTGAACAAATGGAAGCCATTAAAAAGATGAATTATAGGGGATGGCGGAGCAAAGTGATAGACATCACATACTCAAAGGATCGTGGTAAGAAAGGGTTGGACGAAGCTTTGGACAGGATATGTGCAGAAGCACATGATGCAATTAATGCTGGCTACACCACCCTTGTGCTGTCTGATAGAGCCTTCTCAAGGAAACGGGTTTCTGTTAGCTCCCTCTTGGCCGTTGGTGCTGTCCATCAACATCTAGTTAAAACACTTGAGCGCACTAGAGTTGCCTTGATGGTTGAATCTGCTGAACCACGTGAAGTGCATCACTTCTGCACGCTTGTTGGGTTTGGTGCTGATGCTATATGCCCATATTTGGCTATAGAGACAATCTGGCGACTGCAAGTTGATGGAAAGATCCCACCAAAAGCTGGTGGGGAATTCTACTCAAAAGGTGAATTGGTCAAGAAGTACTTCAAAGCAAGCAACTATGGAATGATGAAGGTCCTTTCGAAGATGGGAATATCTACTTTGGCCTCTTACAAAGGTGCTCAGATTTTTGAAGCTCTGGGTCTTTCCTCAGAAGTAATTGAAAGGTGCTTTGCCGGAACCCCAAGCCGAGTTGAGGGGGCAACATTTGAGATGCTTGCTCGCGATGCTCTTAAATTGCATGAATTGGCATTTCCTCCTCGTGTTTTCTCTCCTGGGAGTGCTGAAGCTGTTGCTTTGCCAAATCCTGGCGATTACCACTGGAGAAAAGGTGGTGAAATTCACTTGAATGATCCACTTGCTATAGCAAAGCTTCAAGAGGCTGCCAGAACTAACAGTGTAGATGCATATAAACAGTACTCCAAGATCATTCATGAGTTAAATAAGGCTTGCAACTTGCGAGGAATACTGAAATTTAAAGAGGCAGCAGTGAAGATTTCACTTGATGAAGTTGAACCTGCTAGTGAGATAGTTAAACGATTTTGCACTGGGGCCATGAGTTATGGGTCAATCTCATTGGAGGCGCACACAACATTGGCAACTGCTATGAATAAGATTGGAGGGAAATCCAACACAGGTGAGGGTGGTGAGCAACCATCACGCATGGAGCCTCTTCCTGATGGCTCAATGAACCCAAAAAGAAGTGCTATCAAGCAGGTTGCTAGTGGGAGATTTGGTGTTTCAAGTTACTATCTTACAAATGCTGATGAATTGCAGATAAAGATGGCCCAGGGAGCTAAACCAGGAGAGGGAGGTGAACTTCCTGGCCACAAGGTTGTAGGAGACATTGCTGTCACCAGGAATTCAACTCCTGGGGTAGGACTTATCAGCCCCCCACCTCATCACGATATTTATTCCATTGAAGATCTTGCCCAATTAATTCATGATCTAAAGAATGCCAACCCGGCTGCTCGAATTAGTGTCAAGTTGGTATCAGAAGCTGGAGTAGGCATAATTGCTAGTGGAGTTGTTAAAGGGCATGCTGACCATGTCTTGATCTCCGGCCATGATGGAGGGACAGGGGCATCCAGGTGGACTGGAATAAAGAATGCTGGGCTCCCTTGGGAACTTGGCTTGGCCGAGACCCACCAAACTTTGGTAGCTAATGACCTCCGTGGTCGCACAACTCTCCAAACTGATGGGCAACTCAAAACAGGAAGAGATGTGGCCATAGCTGCTCTCCTTGGTGCAGAAGAGTTTGGTTTCAGTACAGCTCCACTCATTACTCTCGGTTGCATTATGATGCGGAAGTGCCACAAGAATACCTGTCCTGTTGGCATTGCTACCCAAGATCCAGTACTCAGAGAAAAGTTTGCTGGAGAACCTGAGCATGTCATCAACTTCTTCTTCATGGTTGCTGAAGAGATGAGAGAAATTATGGCCCAGCTTGGGTTTAGGACTGTCAATGAGATGGTTGGCCGTTCAGACATGCTTGAAGTTGATAAAGAAGTCACTAAGACCAGTGAGAAATTGCAGAACATTGATCTCTCTCTATTGCTTAGACCTGCAGCTGAACTGCGGCCAGAAGCTGCTCAATACTGTGTGCAAAAACAAGATCATGGTTTGGACATGGCTTTGGATAATAAGCTCATTGGTTTGTCCCATGCTGCTTTGGAGAAGGGTCTCCCAGTATACATTGAAAGTCCAATTTATAATGTGAACCGTGCTGTGGGAACTATGCTTAGCCATGAGGTGACCAAAAGGTACCTCTTAGATGGTCTTCCTAATGACACCATTCATATCAGATTTACAGGAAGCGCAGGCCAGAGCTTTGGTGCATTCCTTTGTCCTGGTATCACTCTGGAACTTGAAGGCGATAGCAATGATTATGTTGGTAAAGGGTTGTCTGGCGGCAAGATTGTAGTATATCCTCCAAAGAAGAGTACCTTTGACCCAAAGACTAATATTGTAATTGGTAATGTGGCACTCTATGGAGCTACACGTGGTGAGGCATATTTCAATGGGATGGCCGCAGAAAGATTTTGTGTGCGTAATTCTGGGGCTAAGGCGGTAGTTGAAGGCGTTGGAGATCATGGATGCGAGTATATGACTGGTGGGATAGTAGTTGTCCTTGGAAACACTGGCCGAAATTTTGCGGCAGGAATGAGTGGTGGAATTGCTTACGTTCTTGATATGGATGGAAAATTCCAATCTCGATGCAACCAGGAACTTGTAGATTTGGACAAGGTTGAGGAGGAGGAGGATATTATTACTCTTAGAATGTTGATACAACAACATCAGCGTCACACAGATAGCGTGCTTGCCAAAGAAGTGCTTTCTGACTTTGAAAATCTTCTTCCAAAATTTATCAAGGTGTTCCCCAGGGAGTACAAACGTGTTTTGGCTGGTATGAAGTCAAAGGAAGCCTCCAAAAACGCATCTTCGCCTGCTGCAATTGCAGAAGAGGGGCCAGATGAAGCAGAACTGAATGAGAAAGATGCTTTTGAAGAGCTTAAGAAAATGGCTGCTGCATCTTCAAATGGGAAGCCAAGTCAGAAGGTTGAACAGGCTGAATCATCCAAGAGACCCAGTAGAGTCACTGATGCAGTTAAACATAGAGGTTTTGTTGCTTATGAGCGTGAAGGTGTTCAGTATAGGGATCCTAATGTTCGGATGAACGATTGGAAGGAAGTGATGGAGGAGTCGAAGCCTGGCCCACTTCTGAAAACCCAGTCAGCCCGTTGCATGGACTGTGGTACTCCTTTCTGTCATCAGGAAAATTCTGGATGTCCTCTTGGAAATAAAATACCAGAGTTTAATGAGTTAGTATACCAAAATAGGTGGCGAGAGGCATTGGAAAGGCTTCTCGAGACAAATAACTTCCCCGAGTTCACTGGTCGGGTGTGCCCAGCACCCTGTGAAGGTTCTTGTGTCCTTGGCATTATTGAGAATCCAGTGTCTATTAAAAGCATTGAATGTGCTATCATAGACAAGGGATTTGAGGAGGGTTGGATGGTGCCACGGCCTCCCCCCAAAAGAACTGGGAGAAGAGTTGCCATTGTTGGAAGCGGACCAGCTGGGTTGGCAGCTGCTGATCAACTGAATAAAATGGGACACACAGTAACTGTGTATGAGAGAGCTGACAGGATTGGAGGGCTTATGATGTATGGGGTTCCCAACATGAAAACAGACAAAGTGGATATAGTTCAACGACGGGTCAACCTTATGGCAGAGGAGGGAGTCAATTTTATGGTGAATGCTAATGTTGGACATGATCCTATGTACGCTCTTGGTCGGCTTCAAGAAGAAAATGATGCTATTGTGTTAGCTGTCGGAGCTACGAAACCAAGGGATCTTCCTGTTCCTGGGCGGGAGTTGTCAGGAGTTCATTTTGCCATGGAGTTTCTTCATGCAAACACTAAAAGCTTGCTCGATAGCAATCTTCAAGATGGTAACTACATTTCTGCAAAGGGAAAAAAAGTTGTGGTCATTGGTGGGGGTGATACGGGCACAGATTGCATAGGGACATCCATTCGTCATGGGTGTAGTAGCATAGTAAACCTTGAACTTCTCCCACAGCCTCCCGAAACTAGGGCACCAGGCAACCCTTGGCCACAGTGGCCTCGCGTATTCCGTATAGATTACGGGCACCAAGAAGCTGCAGCTAAATTTGGCAAAGATCCAAGATCTTATGAGGTATTGACTAAGCGGTTTGTGGGAGATGAGAATGGAGTTTTGAAGGGACTTGAAGTCATACGAGTCCGCTGGGAAAAGGATGAGACAGGGAAGTTTCAGTTTAAGGAAATTGAGGGCAGTGAGGAAATCATCGAGGCTGATCTAGTGTTACTTGCCATGGGATTCCTTGGCCCTGAATCTACAATTGCAGAGAAATTGGGTATGGAGCGAGACAACAGGTCAAACTTCAAGGCAGATTATGGTCGCTTCTCAACCAGTGTGAAAGGTGTCTTTGCAGCCGGCGATTGTCGCCGTGGCCAGTCCCTCGTGGTATGGGCAATTTCGGAGGGACGCCAAGCTGCTTCACAAGTTGATAGGTACCTCACGAAAGAAGACACAGAGTACAACATTGCTCATACCAAGAGGCAGCAGCAAGACCTCACCAAGAGACAGCAGGGCGGTAGCAAGTACACAGTGATGACTTAA 6603 0.4645 MSSSSLSFAAAPAWSACTLPSNIASSRTQLNVRTVAKAKPMSFFGTRLRSSCRSLGSERLHVWRSQGPGRSPELRVVVRSALSAVPEKPMGLYDPAMDKDSCGVGFVAELSGEGNRKTVTDALEMLVRMTHRGACGCEANTGDGAGILVALPHQFYTEVVDFELPPPGKYAVGMFFLPTSDSRREESKNVFRKVAESLGHSVLGWRSVPTDNTGLGKSALQTEPVIEQVFLTPSTKSKLDLERQMYILRKLSDAAITSALDLHSDGIADFYTCSLSSRTVVYKGQLTPAQLKGYYFADLGNERFTSYMALIHSRFSTNTFPSWDRAQPMRVLGHNGEINTLRGNVNWMKAREGLLKCKELGLSENELKKLLPIVNTTSSDSGAFDGVLEFLVQSGKSLPEAVMMMIPEAWQNDKNMDPQRKAFYEYFSALMEPWDGPALISFTDGHYLGATLDRNGLRPGRFYVTHSGRVIMASEVGVVDIPPEDVCRKGRLNPGMMLLVDFEKHAVVNDDALKEQYSLSRPYGEWLKNQKIQLQDIVDSVHESERVPPSIAGVIPASGDDADMENMGIHGLLTPLKAFGYTVESLEMLLLPMAKDGTEALGSMGNDTPLAVMSNREKLTFEYFKQMFAQVTNPPIDPIREKIVTSMECMVGPEGDLTEITEEQCHRLSLKGPLLSIEQMEAIKKMNYRGWRSKVIDITYSKDRGKKGLDEALDRICAEAHDAINAGYTTLVLSDRAFSRKRVSVSSLLAVGAVHQHLVKTLERTRVALMVESAEPREVHHFCTLVGFGADAICPYLAIETIWRLQVDGKIPPKAGGEFYSKGELVKKYFKASNYGMMKVLSKMGISTLASYKGAQIFEALGLSSEVIERCFAGTPSRVEGATFEMLARDALKLHELAFPPRVFSPGSAEAVALPNPGDYHWRKGGEIHLNDPLAIAKLQEAARTNSVDAYKQYSKIIHELNKACNLRGILKFKEAAVKISLDEVEPASEIVKRFCTGAMSYGSISLEAHTTLATAMNKIGGKSNTGEGGEQPSRMEPLPDGSMNPKRSAIKQVASGRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVVGDIAVTRNSTPGVGLISPPPHHDIYSIEDLAQLIHDLKNANPAARISVKLVSEAGVGIIASGVVKGHADHVLISGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTTLQTDGQLKTGRDVAIAALLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMVAEEMREIMAQLGFRTVNEMVGRSDMLEVDKEVTKTSEKLQNIDLSLLLRPAAELRPEAAQYCVQKQDHGLDMALDNKLIGLSHAALEKGLPVYIESPIYNVNRAVGTMLSHEVTKRYLLDGLPNDTIHIRFTGSAGQSFGAFLCPGITLELEGDSNDYVGKGLSGGKIVVYPPKKSTFDPKTNIVIGNVALYGATRGEAYFNGMAAERFCVRNSGAKAVVEGVGDHGCEYMTGGIVVVLGNTGRNFAAGMSGGIAYVLDMDGKFQSRCNQELVDLDKVEEEEDIITLRMLIQQHQRHTDSVLAKEVLSDFENLLPKFIKVFPREYKRVLAGMKSKEASKNASSPAAIAEEGPDEAELNEKDAFEELKKMAAASSNGKPSQKVEQAESSKRPSRVTDAVKHRGFVAYEREGVQYRDPNVRMNDWKEVMEESKPGPLLKTQSARCMDCGTPFCHQENSGCPLGNKIPEFNELVYQNRWREALERLLETNNFPEFTGRVCPAPCEGSCVLGIIENPVSIKSIECAIIDKGFEEGWMVPRPPPKRTGRRVAIVGSGPAGLAAADQLNKMGHTVTVYERADRIGGLMMYGVPNMKTDKVDIVQRRVNLMAEEGVNFMVNANVGHDPMYALGRLQEENDAIVLAVGATKPRDLPVPGRELSGVHFAMEFLHANTKSLLDSNLQDGNYISAKGKKVVVIGGGDTGTDCIGTSIRHGCSSIVNLELLPQPPETRAPGNPWPQWPRVFRIDYGHQEAAAKFGKDPRSYEVLTKRFVGDENGVLKGLEVIRVRWEKDETGKFQFKEIEGSEEIIEADLVLLAMGFLGPESTIAEKLGMERDNRSNFKADYGRFSTSVKGVFAAGDCRRGQSLVVWAISEGRQAASQVDRYLTKEDTEYNIAHTKRQQQDLTKRQQGGSKYTVMT* 2201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2604 2200 Pfam Glutamate synthase central domain 576 864 IPR006982 GO:0006807|GO:0015930
Ahy17g2604 2200 PRINTS Adrenodoxin reductase family signature 1831 1853 - -
Ahy17g2604 2200 PRINTS Adrenodoxin reductase family signature 1897 1907 - -
Ahy17g2604 2200 PRINTS Adrenodoxin reductase family signature 1975 1989 - -
Ahy17g2604 2200 PRINTS Adrenodoxin reductase family signature 1854 1867 - -
Ahy17g2604 2200 Pfam Pyridine nucleotide-disulphide oxidoreductase 1831 2156 IPR023753 GO:0016491
Ahy17g2604 2200 SUPERFAMILY Alpha subunit of glutamate synthase, C-terminal domain 1351 1615 IPR036485 GO:0016491
Ahy17g2604 2200 PIRSF GOGAT 26 2192 IPR012220 GO:0005506|GO:0006537|GO:0010181|GO:0016040|GO:0050660
Ahy17g2604 2200 Pfam Conserved region in glutamate synthase 931 1300 IPR002932 GO:0006537|GO:0015930|GO:0016638
Ahy17g2604 2200 SUPERFAMILY FAD/NAD(P)-binding domain 1827 2167 IPR036188 -
Ahy17g2604 2200 PANTHER GLUTAMATE SYNTHASE 1 [NADH], CHLOROPLASTIC 80 2172 - -
Ahy17g2604 2200 Gene3D - 1939 2100 IPR036188 -
Ahy17g2604 2200 Gene3D - 1356 1628 IPR036485 GO:0016491
Ahy17g2604 2200 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 80 2172 - -
Ahy17g2604 2200 Pfam Glutamine amidotransferases class-II 102 526 IPR017932 -
Ahy17g2604 2200 TIGRFAM GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 1685 2170 IPR006005 GO:0006537|GO:0016639
Ahy17g2604 2200 MobiDBLite consensus disorder prediction 1019 1044 - -
Ahy17g2604 2200 CDD GltS 102 521 - -
Ahy17g2604 2200 Gene3D Aldolase class I 916 1354 IPR013785 -
Ahy17g2604 2200 MobiDBLite consensus disorder prediction 1655 1680 - -
Ahy17g2604 2200 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 102 528 IPR029055 -
Ahy17g2604 2200 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 102 503 IPR017932 -
Ahy17g2604 2200 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 102 538 IPR029055 -
Ahy17g2604 2200 Pfam Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 1706 1817 IPR028261 -
Ahy17g2604 2200 Gene3D - 1830 1938 - -
Ahy17g2604 2200 SUPERFAMILY alpha-helical ferredoxin 1683 1840 - -
Ahy17g2604 2200 SUPERFAMILY FMN-linked oxidoreductases 571 1334 - -
Ahy17g2604 2200 Pfam GXGXG motif 1384 1569 IPR002489 GO:0016491
Ahy17g2604 2200 Gene3D - 1665 1829 IPR009051 GO:0051536
Ahy17g2604 2200 MobiDBLite consensus disorder prediction 2180 2200 - -
Ahy17g2604 2200 MobiDBLite consensus disorder prediction 2186 2200 - -
Ahy17g2604 2200 CDD gltB_C 1360 1609 IPR002489 GO:0016491
Ahy17g2604 2200 Gene3D Aldolase class I 556 915 IPR013785 -
Ahy17g2604 2200 CDD GltS_FMN 933 1312 IPR002932 GO:0006537|GO:0015930|GO:0016638
Ahy17g2604 2200 MobiDBLite consensus disorder prediction 1620 1643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2604 Ahy-Chr17 122527467 122538944 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2604 K00264 - gmx:100815931 3930.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2604 17 122527467 122538944 Ahy17g2604 17 122527467 122538944 ECH
Ahy17g2604 17 122527467 122538944 Ahy8g0382 8 7968150 7979634 hybridization