Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2589 ATGGCGATCATCTCCGATTTCAACGAAGATGACCACAAAGAAACTCGCACCAAACTCTCATCTTCCTCCTCTCAATCCCCTTCTTCTTCTTCCTCTTCCTCCTCATCGTTCAGCGCCAGCTTCGATCCCTCAAATCCCGTCGCTTTTCTCCAGAAGGTCTTCGATTTCGTCAACCAAGAAAGTGACTTCTTTGGAACTGACGCGGCAGAGAAAGAGATCGCCTCACTGGCACGTGCCACTAGGGACAAGCGCAAGAAGAAAGCGGAGGAGCTCAAGGCTGCCGCCGCCGCCGAGGCTGAAGCCAAAAAGAAGGCAGAGAAGAGGCTGAAGGAGGAGAAGGAGCACAAGTCTGCTCAAGACACGAAGAAACAAGAATCTGCTGCTAAAATAGTTCCTAACAAAGGTAATGGTATGGATCTGGAGAAATATTCCTGGACTCAGACTCTACAGGAGGTCACTGTTAATGTTCCGGTGCCAAGTGGAACCAAATCAAGGTTTGTTATCTGTGAGATTAAGAAGAACCATATAAAAGTTGGACTTAAAGGCCAGCCACCAATTATTGAGGGGGAACTATATAAGCCTGTCAAGCCTGATGACTGCTATTGGAGCATAGAGGATCAAAGTGCGATTTCTATCCTTTTAACCAAGCATGATCAAATGGAGTGGTGGAAATGCTTGGTAAAAGGTGATCCTGAAATTGATACCCAAAAAGTTGAACCTGAGAATAGCAAACTTTCTGATCTCGATCCAGAGACTCGGCAGACTGTTGAAAAAATGATGTTTGATCAGAGGCAAAAGTCAATGGGTCTTCCAACCAGTGATGAACTCCAAAAGCAAGAACTCCTAAAGAAATTTATGGCTGAGCATCCGGAGATGGACTTCTCAAGGGCAAAAATAGCATAA 903 0.4551 MAIISDFNEDDHKETRTKLSSSSSQSPSSSSSSSSSFSASFDPSNPVAFLQKVFDFVNQESDFFGTDAAEKEIASLARATRDKRKKKAEELKAAAAAEAEAKKKAEKRLKEEKEHKSAQDTKKQESAAKIVPNKGNGMDLEKYSWTQTLQEVTVNVPVPSGTKSRFVICEIKKNHIKVGLKGQPPIIEGELYKPVKPDDCYWSIEDQSAISILLTKHDQMEWWKCLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDELQKQELLKKFMAEHPEMDFSRAKIA* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2589 300 MobiDBLite consensus disorder prediction 19 42 - -
Ahy17g2589 300 MobiDBLite consensus disorder prediction 1 42 - -
Ahy17g2589 300 PANTHER NUCLEAR MOVEMENT PROTEIN NUDC 26 299 IPR037898 -
Ahy17g2589 300 ProSiteProfiles CS domain profile. 138 227 IPR007052 -
Ahy17g2589 300 MobiDBLite consensus disorder prediction 1 18 - -
Ahy17g2589 300 Pfam CS domain 142 216 IPR007052 -
Ahy17g2589 300 PANTHER NUCLEAR MIGRATION PROTEIN NUDC 26 299 - -
Ahy17g2589 300 MobiDBLite consensus disorder prediction 102 133 - -
Ahy17g2589 300 MobiDBLite consensus disorder prediction 102 123 - -
Ahy17g2589 300 SUPERFAMILY HSP20-like chaperones 125 242 IPR008978 -
Ahy17g2589 300 CDD p23_NUDC_like 143 227 - -
Ahy17g2589 300 Gene3D - 134 261 IPR008978 -
Ahy17g2589 300 Coils Coil 85 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2589 Ahy-Chr17 122212426 122214987 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2589 K25866 - gmx:100813799 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2589 17 122212426 122214987 Ahy17g2589 17 122212426 122214987 ECH
Ahy17g2589 17 122212426 122214987 Ahy8g0373 8 7661040 7663626 hybridization