Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2572 ATGGAGTCACCACACTCAAGGTTGTCCATGCTCATCTCCTCCCGTCCAACCACACCACCGGACTCTCCCCCTCCTCCGCCGCACACGGCGCCAGTGTCCGTGCCTTTCAAGTGGGAGGAAGCACCCGGTAAGCCTAGGCAGCCTTGCCACGTGGACACTAACGAAAAGGATACTAGATCGTTGGAGCTTCCTCCGAGGTTGTTGTTTTTAGAGTACTCCAACAACAAAGTGTCGAGCATGGACGTGCCTTCTCCCACCACCGTCTTGGCTGGGCCTTACGTGGGCCGGGCCATGTCCTTCACCACTTCCTACAGAACTCCCCGGGACACTCACAATAATTCTTTTTCCACTTTTGGGTCTGCAAGGTTTCCCACTTCCACCAACATCCCCCACCATGATCCCGAGGGCACTTTCGACTTTTTCCCTCATCATAATAATAAGAAGGTTAAGTTTCCACGCCGCTACTTGAGCCTCTCTAACAACCACTCCAACACAAACTCACATTTTTGGGCAAGCATTTATGAAAGCTTTAAGCAAATGGTCCCATGGAAACGCAAGCAAGAAAAACAAAGAAAACGAGCTTATTAA 588 0.5085 MESPHSRLSMLISSRPTTPPDSPPPPPHTAPVSVPFKWEEAPGKPRQPCHVDTNEKDTRSLELPPRLLFLEYSNNKVSSMDVPSPTTVLAGPYVGRAMSFTTSYRTPRDTHNNSFSTFGSARFPTSTNIPHHDPEGTFDFFPHHNNKKVKFPRRYLSLSNNHSNTNSHFWASIYESFKQMVPWKRKQEKQRKRAY* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2572 195 MobiDBLite consensus disorder prediction 17 32 - -
Ahy17g2572 195 PANTHER OS01G0551000 PROTEIN 144 191 - -
Ahy17g2572 195 PANTHER OS01G0551000 PROTEIN 7 108 - -
Ahy17g2572 195 MobiDBLite consensus disorder prediction 43 58 - -
Ahy17g2572 195 Pfam Protein of unknown function (DUF688) 6 66 IPR007789 -
Ahy17g2572 195 MobiDBLite consensus disorder prediction 1 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2572 Ahy-Chr17 121361052 121362777 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2572 - - ahf:112766685 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2572 17 121361052 121362777 Ahy16g2945 16 144081504 144083498 ECH
Ahy17g2572 17 121361052 121362777 Ahy17g2572 17 121361052 121362777 ECH
Ahy17g2572 17 121361052 121362777 Ahy8g0360 8 7410420 7412024 hybridization