Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2568 ATGGCTGCCACAGCAACAGCAGAAGCTGGTTCCCAATGGCCATTCAGCTGTGACCTAGAAGTGGATTTTGGACATGAACAAAATGCTGCTATCGTATGCGCAGCCTTAGCTGTTGATAAGGAGTTGCAACCAGACAAGGTGAAACGACTCATGGCAGTGTCTCATGGAAAGCTTTCAGTGCACTTTGAGGCAACGGAAGCAAGATTTCTTCGGGCATCTTTTAGTGCTTTTGTAGATGTCCTTACACTGGCCACAAAAACGATTGAAGAATTTGGTCAAGGAATGGAGTTGTGA 294 0.4592 MAATATAEAGSQWPFSCDLEVDFGHEQNAAIVCAALAVDKELQPDKVKRLMAVSHGKLSVHFEATEARFLRASFSAFVDVLTLATKTIEEFGQGMEL* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2568 97 Pfam Transcription factor Pcc1 16 89 IPR015419 -
Ahy17g2568 97 PANTHER GEO08993P1 8 95 - -
Ahy17g2568 97 Gene3D - 5 95 - -
Ahy17g2568 97 PANTHER EKC/KEOPS COMPLEX SUBUNIT PCC1 FAMILY MEMBER 8 95 IPR015419 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2568 Ahy-Chr17 121329414 121331034 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2568 K15902 - pop:7496405 152.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2568 17 121329414 121331034 Ahy17g2568 17 121329414 121331034 ECH