Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2555 ATGGCGGAACTGATAGGGCCTCGCTTGTACAGTTGCTGTAATTGTAGAAACCATGTGTCACTCCATGATGATATCATTTCTAAGGCTTTTCAGGGAAGAAACGGCCGAGCTTTTCTTTTTTCCCATGCCATGAATGTTGTCACAGGACCAAAAGAAGACAGGCATCTCATGACTGGCCTTCACACCGTTGCTGATGTTTATTGTGGTGATTGCCGTGAGGTCTTGGGTTGGAAGTATGAAAAAGCTTACGAAGCATCCCAGAAGTACAAGGAAGGAAAATTCATACTCGAGAAATCAAAAATAGTTAGGGAGAACTGGTAG 321 0.4361 MAELIGPRLYSCCNCRNHVSLHDDIISKAFQGRNGRAFLFSHAMNVVTGPKEDRHLMTGLHTVADVYCGDCREVLGWKYEKAYEASQKYKEGKFILEKSKIVRENW* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2555 106 PANTHER PROTEIN YIPPEE-LIKE 1 106 - -
Ahy17g2555 106 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 10 101 IPR004910 -
Ahy17g2555 106 ProSiteProfiles Yippee domain profile. 8 105 IPR034751 -
Ahy17g2555 106 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 106 IPR039058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2555 Ahy-Chr17 120989604 120991906 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2555 - - gmx:100800980 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2555 17 120989604 120991906 Ahy17g2555 17 120989604 120991906 ECH
Ahy17g2555 17 120989604 120991906 Ahy8g0345 8 7125112 7127535 hybridization