Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2542 ATGAATCCAATGGAAATCAATAGTATAAACAGTGAAGATCTCAAAGAAATTGAGAATTGCAACAGAGAGGACCCTGAACAGCCGCAGATTGAGGGTGAGGAGCTGAACAGGATAGCTACATGGGGAAAGCAAATCACTGTCCGGGGACTAATAGCTAGCTTACTGATTGGAATCATTTACAGTGTGATAGTGATGAAGCTGGGCCTTACAACTGGACTAGTACCTAATCTCAATGTCTCGGCTGCACTGCTTGGCTTTGTGTTCATTAGGACTTGGACTAAGCTCCTTTCCAAAGCCAATATTATTTCAACACCTTTCACTCGGCAGGAGAATACCGTAATCCAGACTTGTGCAGTGGCTTGCTACAGCATCGCCATAGCAGGTGGTTTTGGTTCTTATCTCTTGGGATTGAATAGGAGGACATATGAGCAAGCAGGGATTGATACAGAAGGGAATACACCTAACAGCATCAAGGAACCTGGAATCGGCTGGATGACAGCCTTTCTCTTCGTTACCAGTTTTGTAGGGCTATTGGCGCTGGTCCCCATAAGAAAGATAATGATAATAGACTACAAATTGACTTATCCCAGTGGAACAGCTACTGCAATTCTTATTAATGGATTCCATACTCCTAAAGGAGACGCCATGGCCAAGAAGCAGGTTCACGGTTTCATGAAATACTGCTCATTCAGTTTCCTTTGGGGATTCTTTCAATGGTTTTATACGGGTGGAGATCAGTGTGGGTTTGTTCAGTTTCCAACTTTTGGATTGAAAGCTTGGAAAAACTCATTTTACTTTGATTTCAGCATGACTTATGTTGGAGCAGGAATGATTTGCTCCCATCTTGTAAATCTATCCTTGCTTCTCGGTGCTGTGCTTTCGTGGGGCATTATGTGGCCATTAATCGGCAGACTAAAAGGCGAATGGTTCCCTGCGAGCCTACCAGAAAGTAGCATGAAGAGTCTTAATGGTTATAAGGTCTTTGTTTCAATCGCCTTGATCCTTGGTGATGGGATCTATAATTTTGTCAAAATTCTCTGTTTCACAGCCATTAATATCTATGCAAGCATGCAAAAGAAGAAGCGTAATACATATTTGGAGAACCAGAGGCAGCTGTCTCATGACGAATTTAGACAGAATGAAGTGTTTATAAGAGATAGCATTCCAGTATCGTTGGCGGTTGCAGGGTACATATTGCTCAGCATCATTTCCATCATTGTGATACCTTTGATGTTCCCCCAAATGAAGTGGTATTTTGTGGTGGTTGCCTATATTCTTGCACCTGCTCTTGGATTTTGCAATGCTTATGGTGCAGGATTAACTGACATGAACATGGCTTATAACTATGGCAAAGTGGCTCTCTTTGTGCTTGCATCCTTGGCCGGAAAAACTGACGGTGTAGTTGCAGGGCTTGTGGGGTGTGGCTTGATCAAATCAATTGTTTCCATTTCTTCTGATTTGATGCATGATTTCAAGACCGGCCATCTCACTTTCACATCCCCTCGTTCAATGCTTCTAAGCCAAGCAATCGGCACTGGGATAGGCTGTGTTGTGGCTCCACTCACATTCTTCCTTTTCTACAATGCCTTTGATGTTGGGAAACCAGATGGTGATTACAAGGCCCCATATGCCCTCATTTATAGAAACATGGCCATTCTTGGCGTCGAAGGCTTTTCCGCCCTCCCCCATCATTGCCTGCAACTTTGTTATGGTTTTTTCGCGTTTGCGATAGCAGCCAACTTGGTGAGGGATCTTTCCCCCAAGAAAGTTGGAAGATGGATTCCACTTCCAATGGCAATGGCTGTCCCTTTCTTAGTTGGTGGATACTTTGCAATTGACATGTGTGTGGGTAGCTTGATTGTGTATTCTTGGCACACACTGAAGAGTGAGGAGGCAAATTTGATGGTTCCTGCAGTTGCTTCTGGTTTGATTTGTGGTGATGGATTATGGATTCTACCTTCATCCCTTCTCGCTTTGTTCGGGGTTCGGCCACCAATCTGCATGAGCTTCTTTACATCCAAGTAG 2025 0.438 MNPMEINSINSEDLKEIENCNREDPEQPQIEGEELNRIATWGKQITVRGLIASLLIGIIYSVIVMKLGLTTGLVPNLNVSAALLGFVFIRTWTKLLSKANIISTPFTRQENTVIQTCAVACYSIAIAGGFGSYLLGLNRRTYEQAGIDTEGNTPNSIKEPGIGWMTAFLFVTSFVGLLALVPIRKIMIIDYKLTYPSGTATAILINGFHTPKGDAMAKKQVHGFMKYCSFSFLWGFFQWFYTGGDQCGFVQFPTFGLKAWKNSFYFDFSMTYVGAGMICSHLVNLSLLLGAVLSWGIMWPLIGRLKGEWFPASLPESSMKSLNGYKVFVSIALILGDGIYNFVKILCFTAINIYASMQKKKRNTYLENQRQLSHDEFRQNEVFIRDSIPVSLAVAGYILLSIISIIVIPLMFPQMKWYFVVVAYILAPALGFCNAYGAGLTDMNMAYNYGKVALFVLASLAGKTDGVVAGLVGCGLIKSIVSISSDLMHDFKTGHLTFTSPRSMLLSQAIGTGIGCVVAPLTFFLFYNAFDVGKPDGDYKAPYALIYRNMAILGVEGFSALPHHCLQLCYGFFAFAIAANLVRDLSPKKVGRWIPLPMAMAVPFLVGGYFAIDMCVGSLIVYSWHTLKSEEANLMVPAVASGLICGDGLWILPSSLLALFGVRPPICMSFFTSK* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2542 674 Pfam OPT oligopeptide transporter protein 44 657 IPR004813 GO:0035673
Ahy17g2542 674 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 41 656 IPR004813 GO:0035673
Ahy17g2542 674 PANTHER METAL-NICOTIANAMINE TRANSPORTER YSL3 11 672 - -
Ahy17g2542 674 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 11 672 IPR045035 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2542 Ahy-Chr17 120717460 120721536 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2542 - - gmx:100820417 1144.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2542 17 120717460 120721536 Ahy17g2542 17 120717460 120721536 ECH
Ahy17g2542 17 120717460 120721536 Ahy8g0330 8 6765419 6770069 hybridization