Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2535 ATGGCTACTTCCACACCTTTCTCACTTTCATGCACTTCCCAAACTAGATTGCTCTACAAAAAAAATCCAATGCAACCATCCCATAATACAACATTATCATTGTTTGGACACAAATCTTTACTTTGCAATAATCCTCTAAGATGCAATCGTGCTTTTACTCCAGTTGTCATGAAACCTAAGAGAGCTCATGTTGGTGTATCAGTGAAGGCACAATGGAACAACAGGAGCATCGAGGTGCTTGATAAGCAGCACATTCCTGTGTCTTTGGCCAAATATGTCTTTGATCTCTCTGAAAAATTCATCAAGGAGAAAGGCTCGTTCACCATTGTTTTATCTGGGGACTCTGTCAAGTACCTAAAGATGTTGGTGGAACCTCCATACATTAACACTATCCAGTGGTCCAAGTGGCATGTATTTTGGGCAGATGAGAAAGCCGTGCCTAAAACCCATCTAGACAGCAACTATAAGCATGCTTATGATAGATTTATTTCCAAGGTGCCAATTCCTATGAATGTGTATACAATTGATGATGCTCTATCAGCTGATATTGCTGCTGATGTGTATGAGATAGGCATCAAAATCAAGGTTGATAGCAAGGTGATAGCTTCATCACAAAACAGTAGACTTCCAAAATTTGATCTCATGTTATTAGACATGGGATCAGAAGGGCAGTTAGCTGGTCTATTCCGAGGGAACCCTGCTCTAACAGAGACTAGAAAGTGGGTTACTGCGGTTAAGAACGCACCTTCGCCACCGGCAGAGAGGATCACTCTTACACTTCCAGTGATCAATGCTTCTTCAAACATAGCAATGGTGGTGACTGGTGCTGGTAAAGCAAATGCAGTGCTGAATGCATTGGCGGAAGGTCAGGAAGGTGATGAAAAGATGCCTGTTCAATTGGTTTCTCCAGAAGGTGAAATGAAATGGTTTCTAGACAAGGGTGCAGGCTCAATGTATTTAAATAGATCGTAA 972 0.4167 MATSTPFSLSCTSQTRLLYKKNPMQPSHNTTLSLFGHKSLLCNNPLRCNRAFTPVVMKPKRAHVGVSVKAQWNNRSIEVLDKQHIPVSLAKYVFDLSEKFIKEKGSFTIVLSGDSVKYLKMLVEPPYINTIQWSKWHVFWADEKAVPKTHLDSNYKHAYDRFISKVPIPMNVYTIDDALSADIAADVYEIGIKIKVDSKVIASSQNSRLPKFDLMLLDMGSEGQLAGLFRGNPALTETRKWVTAVKNAPSPPAERITLTLPVINASSNIAMVVTGAGKANAVLNALAEGQEGDEKMPVQLVSPEGEMKWFLDKGAGSMYLNRS* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2535 323 Gene3D - 72 318 - -
Ahy17g2535 323 CDD 6PGL 88 311 IPR005900 GO:0005975|GO:0006098|GO:0017057
Ahy17g2535 323 SUPERFAMILY NagB/RpiA/CoA transferase-like 81 317 IPR037171 -
Ahy17g2535 323 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 81 308 IPR006148 GO:0005975
Ahy17g2535 323 PANTHER 6-PHOSPHOGLUCONOLACTONASE 1 317 IPR039104 -
Ahy17g2535 323 PANTHER 6-PHOSPHOGLUCONOLACTONASE-RELATED 1 317 - -
Ahy17g2535 323 TIGRFAM pgl: 6-phosphogluconolactonase 82 315 IPR005900 GO:0005975|GO:0006098|GO:0017057
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2535 Ahy-Chr17 120547640 120549575 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2535 K01057 - gmx:100803687 364.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2535 17 120547640 120549575 Ahy17g2535 17 120547640 120549575 ECH
Ahy17g2535 17 120547640 120549575 Ahy8g0324 8 6685241 6687515 hybridization