Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2530 ATGGACTTCCGACAACACTACCAACCACACAAACCCCAATCTTTCATAAATTTGCACACGATCGATTCTGATGCTCAGATGTCGCAACCCAACTCCTACTTTAACCCCGCCGATTTGCTCCACAGTCCTCCCTTAATTGTTGCTGGGCTTGCTCCGGCTGATGGCGGTGCCGATTTGCAATGGAGTTACGGTTTGGAGAAGGAGGGAAAAAGGTTAAAGGAACATGATTTTTTGGAGAACAATTCTCAGGTATCCTGTGTTGATTTCATGCAGCTTCGACCGGTTTCCACTGGGTTGGGTTTGTCACTTGACAATACACGTTTTCCTTCCACCGGAGATTCTGCTTTGTCTTCGCTTGTTGTCGACGATATTGATCGAGAGTTACTTCAGCAGGATGCTGAGTTTGATAGATTTATCCGAGTACAGGGTGAACAAATGCGGCAATCCATTCTACGGAAAGTTCAGGAAACGCAACTTCAGAGTCTATCTATCATTGAAAACGAAGTCCTTCGTAAACTCCATGAGAAAGAATCTGAGGTAGAAACCATCAATAAGAAGAACGTAGAACTTGAAGAGAGAATGGAGCAGTTAAGTGCTGAAGCCGATGTCTGGCAACAACGAGCCAGATATAATGAGAATATGATTTCTGCTTTGAAATTTAAGCTTCAGCAAGTTTATGTCCATAGCAGAGACAGTAAGGAAGGATGTGGTGACAGTGAGGTAGATGATACAGCTTCATGCTTCAACGGCCATTCCATTGATTTTCAACTTCTCTCCCAAGAGAAGAACAATATGAAAGAAATGATGACTTGCAAGGCTTGCAGAGTCAATGAAGTCACCATGCTTTTATTACCTTGTAGGCATCTCTGCCTCTGTAAAAATTGCGAGAGTAAGCTCAGTTTTTGTCCTGTGTGTCAATCCTCTAAATTCATTGGCATGGAGGTGTTTATGTAA 954 0.4298 MDFRQHYQPHKPQSFINLHTIDSDAQMSQPNSYFNPADLLHSPPLIVAGLAPADGGADLQWSYGLEKEGKRLKEHDFLENNSQVSCVDFMQLRPVSTGLGLSLDNTRFPSTGDSALSSLVVDDIDRELLQQDAEFDRFIRVQGEQMRQSILRKVQETQLQSLSIIENEVLRKLHEKESEVETINKKNVELEERMEQLSAEADVWQQRARYNENMISALKFKLQQVYVHSRDSKEGCGDSEVDDTASCFNGHSIDFQLLSQEKNNMKEMMTCKACRVNEVTMLLLPCRHLCLCKNCESKLSFCPVCQSSKFIGMEVFM* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2530 317 ProSiteProfiles Zinc finger RING-type profile. 271 306 IPR001841 -
Ahy17g2530 317 PANTHER F2G19.2 5 317 - -
Ahy17g2530 317 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 256 317 IPR013083 -
Ahy17g2530 317 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 5 317 IPR017066 -
Ahy17g2530 317 Coils Coil 173 207 - -
Ahy17g2530 317 PIRSF SBP1_RNase_bind 3 317 IPR017066 -
Ahy17g2530 317 Pfam Zinc finger, C3HC4 type (RING finger) 269 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2530 Ahy-Chr17 120324175 120326332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2530 271 307 Miscellaneous Gene Families AT2G21380 48.649 1.22e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2530 K19042 - gmx:100811918 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2530 17 120324175 120326332 Ahy17g2530 17 120324175 120326332 ECH