Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2522 ATGCAAAGCCAAAAGGGTTGGAGCTCTGGAAGAGTTGCTCTGCATGTGAATGGTACTCCAACTCCAAGGAAGAACATTGGCGGCGGAGCTATGCTGCCGTTTAATAATGGGAGAGGACTACCTTCAAAGTGGGAAGACGCTGAAAGATGGATTCTAAGCCCTGTAGGTAGAGATGGTGTTAGTGGGAATTTGGTTTCACCACACCATAGGAGACCAAAGTCAAAGAGTGGTCCACTTGGTCCACCAGGTGTTGCTTATTATTCAATGTATTCTCCGGCAGTGCCACTCTTTGGAGGAAGGCATTCCGCTAATTTGGCCGGGCCTTCTCCGTTTTCACCAGCTGTAGCTTCATCTGATTCATTCACAAACCGCTCCGGTGGTGGCCGTGGTGTTGTCGTTCTGCCCACCACAGAGCCTACTTTGCTCCGGTCCGCTAGTGTCCATGGATGTTCTGAAATGCAGAGTGAACCATCAGCGCCTGATCAAGAGGATAAGCTTCATAGCTTCAAAGATGTGGGCACCGATGTATCTGGTGCTGTTTCGAGGAGGGACATGGCAACCCAGATGAGCCCACAGGGTAGCCAATGCTCCTCTCCCAATTTGAGGTCTTCTTTCTCTACCTCCACTCCGTCTTCGTCGACCTTCACAGAATGGCGGAATGTTGCTTCCTCTAAAATGGATATAAGGGATGTTCAGGTAGATGAACATGTCACTGCAACAAAGTGGTCCAAGAAACACAGGGCCTTATTTTCTGGCAGAGGCTCAGAAAATTTTGAAAGCAAGCAAAAGAAAGAAATTAGAAATCTAGCTTCAGCTTGGGATATTGCTGAAACGCCAAAAACTGCCTCTAAGGCTGAAAGGGAGGAAGCCAAAATCAATGCATGGGAGAACTTGCAAAAGGCAAAAGCTGAGACAGCAATACGGAAACTAGAGATGAAGCTAGAAAAGAAGAGAGCATACTCTATAGACAAGATTATGAACAAGCTTAAATTGGCACAGAAAAAGGCTGAGGAAATGAGAAGTTCAGTTATAAACATAGAAGCTGATGCTGATCAAGTTGTACAAACGTCTCGCAAGGCTAAATTATTTCTTAGAATCAGTCAGATGGGTTCATTGAGTGGTTGTTTCAACTGGCATGCCTCTTAA 1146 0.4599 MQSQKGWSSGRVALHVNGTPTPRKNIGGGAMLPFNNGRGLPSKWEDAERWILSPVGRDGVSGNLVSPHHRRPKSKSGPLGPPGVAYYSMYSPAVPLFGGRHSANLAGPSPFSPAVASSDSFTNRSGGGRGVVVLPTTEPTLLRSASVHGCSEMQSEPSAPDQEDKLHSFKDVGTDVSGAVSRRDMATQMSPQGSQCSSPNLRSSFSTSTPSSSTFTEWRNVASSKMDIRDVQVDEHVTATKWSKKHRALFSGRGSENFESKQKKEIRNLASAWDIAETPKTASKAEREEAKINAWENLQKAKAETAIRKLEMKLEKKRAYSIDKIMNKLKLAQKKAEEMRSSVINIEADADQVVQTSRKAKLFLRISQMGSLSGCFNWHAS* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2522 381 PANTHER REMORIN FAMILY PROTEIN 3 378 - -
Ahy17g2522 381 Coils Coil 322 349 - -
Ahy17g2522 381 Pfam Remorin, C-terminal region 266 365 IPR005516 -
Ahy17g2522 381 MobiDBLite consensus disorder prediction 56 80 - -
Ahy17g2522 381 MobiDBLite consensus disorder prediction 185 214 - -
Ahy17g2522 381 MobiDBLite consensus disorder prediction 145 167 - -
Ahy17g2522 381 MobiDBLite consensus disorder prediction 1 33 - -
Ahy17g2522 381 PANTHER OS02G0116800 PROTEIN 3 378 - -
Ahy17g2522 381 Coils Coil 300 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2522 Ahy-Chr17 119926840 119930019 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2522 - - aip:107605841 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2522 17 119926840 119930019 Ahy17g2522 17 119926840 119930019 ECH