Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2486 ATGCCATCGGTGCATTCAAGCCCATGTTACCCAATGGAAAACCCAGCACTAGCATCCCTTCTCCGCCACACGACGGGCGCGGCGGAGAAGCGGAACAAATTCTCCACCGGGGGGCTCTTAAAGATGTTCAAGCTCTTCCCGATGCTGACGTCAGGTTGCAAAATGGTGGCACTGTTGGGAAGACCCCGTAAGCCTATGCTAAAGGACAGCGCAACAACGGGGACAATTTTCGGTTACCGGAAAGGGAGGGTGAGCCTTGCAATACAAGAGGACACGCGGCAAATGCCCATGTTCTTGATCGAGCTTCCCATGCTCACGAGCGCTCTCAACAAGGAGATGGCTTCGGACATAGTTCGCATCGCGCTGGAGAGCGAGACCAAGACCAACAAGAAGAAGCTTCTGGAAGAGTTTGTGTGGGCGGTGTACTGCAATGGAAGGAAAGTAGGGTACTCTATCAGGAGGAAGCAGCTCAGCGATGATGAGTTGCATGTTATGCAGCATCTTCGAGGAGTTTCCATGGGTGCAGGGGTGCTTCCTTCCTCTAATAACAATGACAAGGATAATAGTTTGGATGGTGAAATGACTTATATGAGAGCCCGCTTTGAGAGAGTCGTTGGTTCTAAGGATTCTGAAGCTTTGTATATGATTAATCCAGATGGTGCTCAAGGACCTGAGTTTAGTATCTTCTTTGTTAGAGCTCACTAA 705 0.4993 MPSVHSSPCYPMENPALASLLRHTTGAAEKRNKFSTGGLLKMFKLFPMLTSGCKMVALLGRPRKPMLKDSATTGTIFGYRKGRVSLAIQEDTRQMPMFLIELPMLTSALNKEMASDIVRIALESETKTNKKKLLEEFVWAVYCNGRKVGYSIRRKQLSDDELHVMQHLRGVSMGAGVLPSSNNNDKDNSLDGEMTYMRARFERVVGSKDSEALYMINPDGAQGPEFSIFFVRAH* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2486 234 Pfam Protein of unknown function, DUF617 73 232 IPR006460 GO:0010274
Ahy17g2486 234 PANTHER - 1 233 - -
Ahy17g2486 234 TIGRFAM A_thal_3588: uncharacterized plant-specific domain TIGR01570 72 232 IPR006460 GO:0010274
Ahy17g2486 234 PANTHER PROTEIN MIZU-KUSSEI 1 1 233 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2486 Ahy-Chr17 118799666 118801022 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2486 - - mtr:MTR_3g101300 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2486 17 118799666 118801022 Ahy17g2486 17 118799666 118801022 ECH
Ahy17g2486 17 118799666 118801022 Ahy8g0287 8 5890302 5891556 hybridization