Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2478 ATGGACCTTCGCGAATCCATCACCAACCAAAACGACGTGGCGTTCAGAATCGCCAACCACTTACTATCCAAGCACTCCGGCAACAACAACATAGTGTTTTCGCCCTTATCGCTCCACGTCGTGCTCAGCATCATCGCTGCTGGTTCCAAGGGTCCCACACGCGATCAGATTCTCTCCTTTCTCCGATCTAAATCCACCGACGATCTCAACTCCTTTGCCTCTCAGCTCGTCTCCGTCGTCCTCGCCGACGCCACTCCCGCCGGCGGCCCTCGCCTCTCTTTCGCCGATGGTGTCTGGGTTGATCACTCCCTTTCTCTCAACCCTTCCTTCAAACAACTCGTCAACAACGATTATAAGGCTGTTTTGGCTTCTGTAGATTTCCAGACAAAGGCTGTTGAAGTGAGCAAGGAAGTTAATTCTTGGGCTGAAAAGGAGACAAATGGCCTCATTAAGGAGGTCCTTCCGGCCGGGTCAGTTGACGGCTCAACCAGGCTCATCTTTGCAAATGCAATATACTTCAAAGGTGCATGGACTGAGAAGTTTGATGCACAAATGACGAAGGACCACAACTTTCACCTTCTTGATGGAAGCTCGGTTAAAGCCCCCTTCATTGTCAGCAAGAAGAAACAGTTAATTAGTGCTTTTGATGGTTTCAAAGTGCTTGGCCTTCCTTACAAGCAGGGAGAAGATAAGCGCCAGTTCTCCATGTACTTGCTCCTTCCTGATGCAACAGATGGGTTGTCGGCTTTGGTTGAGAAGGTGAGTTCTGAACGCAGTTTCTTGGAACGCAAGCTTCCTCGTCAAAAAGTGGAAGTAGGTGACTTCAGGATCCCAAAATTCAAGATTTCTTTTGGGTTAGAAACGTCGATTGTATTGAAGGAGCTAGGAGTGGTGTTGCCTTTCGCAGGTGGAGATTTGACTGAAATGGTGGATTCTTCTCTGAGTCAAAATCTGTATGTTTCCAGCATATATCACAAGTCATTTATTGAAGTAAATGAGGAAGGAACTGAAGCTGCAGCAGCCAGTGCCGTGACCATAAAATTGAGGAGTATCCAATTTCCAACCAAGATAGACTTTGTAGCTGATCACCCATTCTTGTTCCTCATCAGAGAAGATCTGACTGGGACTGTCCTCTATATTGGGCAGGTGCTCAATCCTCTTGCTAACTGA 1170 0.4752 MDLRESITNQNDVAFRIANHLLSKHSGNNNIVFSPLSLHVVLSIIAAGSKGPTRDQILSFLRSKSTDDLNSFASQLVSVVLADATPAGGPRLSFADGVWVDHSLSLNPSFKQLVNNDYKAVLASVDFQTKAVEVSKEVNSWAEKETNGLIKEVLPAGSVDGSTRLIFANAIYFKGAWTEKFDAQMTKDHNFHLLDGSSVKAPFIVSKKKQLISAFDGFKVLGLPYKQGEDKRQFSMYLLLPDATDGLSALVEKVSSERSFLERKLPRQKVEVGDFRIPKFKISFGLETSIVLKELGVVLPFAGGDLTEMVDSSLSQNLYVSSIYHKSFIEVNEEGTEAAAASAVTIKLRSIQFPTKIDFVADHPFLFLIREDLTGTVLYIGQVLNPLAN* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2478 389 ProSitePatterns Serpins signature. 359 369 IPR023795 -
Ahy17g2478 389 PANTHER SERPIN-ZX-LIKE 15 388 - -
Ahy17g2478 389 Pfam Serpin (serine protease inhibitor) 9 386 IPR023796 -
Ahy17g2478 389 SMART serpin2 15 386 IPR023796 -
Ahy17g2478 389 CDD serpinP_plants 9 386 - -
Ahy17g2478 389 Gene3D Antithrombin, subunit I, domain 2 28 333 IPR042178 -
Ahy17g2478 389 Gene3D - 177 381 IPR042185 -
Ahy17g2478 389 PANTHER SERINE PROTEASE INHIBITOR, SERPIN 15 388 IPR000215 GO:0004867|GO:0005615
Ahy17g2478 389 SUPERFAMILY Serpins 7 386 IPR036186 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2478 Ahy-Chr17 118495950 118497881 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2478 K13963 - gmx:100775287 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2478 17 118495950 118497881 Ahy17g2478 17 118495950 118497881 ECH
Ahy17g2478 17 118495950 118497881 Ahy8g0280 8 5797944 5799850 hybridization