Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2422 ATGGCGCTTACCACATACCTCAAAACCTCTTCATTTTTTCTTATATTATTCTTATTAGGTAATGATATAGCGTCCGGCACCATCTTCACGCTCGAAAACCACTGCACCTACACCGTCTGGCCCGGAACTCTTTCCGGTAACGGTGCTGCCCCTCTCGGCGACGGTGGATTCTCTCTAGCACCGGGATCGTCACTTCAGCTGACAGCTCCCTCCGGCTGGTCCGGACGGTTCTGGGCGCGAACTGACTGCAGCTTCGACGATGCCGGCAACGGAAAATGCGCCACCGGAGACTGCCCCGGGGGTCTCAGGTGCACAGGCGGAGGTGCTCCTCCGGTGTCGCTGGCGGAGTTCACGATCGGAACCCCAAGCAGCGACAAGGACTTCTACGACGTGAGTCTGGTTGACGGTTACAATGTTGGTATGGGAGTACGGGCAACCGGTGGAACCGGTGACTGCCAGTACGCGGGATGTGTTACGGACTTGAACAGTGACTGTCCGGCTGAGTTGCAGGTCATCAACGAGGCGGGAGCGGTGGTGGCTTGCAAGAGCGCTTGCGCTGCGTTTAACACGGCGGAGTTCTGCTGCACCGGCGATCACTCTACGCCGCAGAGTTGCAGTCCGACGCAATACTCTGAGATGTTCAAGAATGCGTGCCCCTCTGCTTATAGTTACGCGTATGATGATGCTTCCAGCACTTGCACTTGTTCTGGTTCCGAATACCTTATTACTTTTTGCCCAACGGGCTCTTCTTAG 753 0.5604 MALTTYLKTSSFFLILFLLGNDIASGTIFTLENHCTYTVWPGTLSGNGAAPLGDGGFSLAPGSSLQLTAPSGWSGRFWARTDCSFDDAGNGKCATGDCPGGLRCTGGGAPPVSLAEFTIGTPSSDKDFYDVSLVDGYNVGMGVRATGGTGDCQYAGCVTDLNSDCPAELQVINEAGAVVACKSACAAFNTAEFCCTGDHSTPQSCSPTQYSEMFKNACPSAYSYAYDDASSTCTCSGSEYLITFCPTGSS* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2422 250 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Ahy17g2422 250 PRINTS Pathogenesis-related protein signature 89 118 IPR001938 -
Ahy17g2422 250 PRINTS Pathogenesis-related protein signature 236 245 IPR001938 -
Ahy17g2422 250 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Ahy17g2422 250 PRINTS Pathogenesis-related protein signature 76 87 IPR001938 -
Ahy17g2422 250 ProSitePatterns Thaumatin family signature. 89 104 IPR017949 -
Ahy17g2422 250 PIRSF PR5 1 250 IPR001938 -
Ahy17g2422 250 PANTHER PATHOGENESIS-RELATED PROTEIN 5 24 246 - -
Ahy17g2422 250 ProSiteProfiles Thaumatin family profile. 26 248 IPR001938 -
Ahy17g2422 250 SUPERFAMILY Osmotin, thaumatin-like protein 28 247 IPR037176 -
Ahy17g2422 250 CDD TLP-PA 28 245 - -
Ahy17g2422 250 PANTHER OS03G0233200 PROTEIN 24 246 IPR001938 -
Ahy17g2422 250 Gene3D Thaumatin 27 246 IPR037176 -
Ahy17g2422 250 Pfam Thaumatin family 33 246 IPR001938 -
Ahy17g2422 250 SMART tha2 29 246 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2422 Ahy-Chr17 116065964 116067479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2422 11 250 Receptor kinase-like Gene Family AT5G38280 45.600 6.91e-64 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2422 - - gmx:100809378 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2422 17 116065964 116067479 Ahy17g2422 17 116065964 116067479 ECH