Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2417 ATGCTTGAAGCAATGGAAGGTTCCATGAATGGAGGCGTCCCGCAGTTACAGAGCTATGGAGATAGCAGCGAGGAGGAGCTCTCGGTGCTTCCTCGTCACACGAAAGTGGTGGTTACCGGAAATAACCGCACGAAATCGGTGCTCGTTGGTCTCCAAGGCGTGGTCAAGAAGGCCGTTGGACTAGGCGGTTGGCATTGGCTGGTTCTTACAAATGGCATTGAAGTGAAGCTACAGCGGAATGCTCTTAGTGTGATTGAAGCACCCACTGGCAATGAGGAAGATAATGACCTTGAATTTGAAAACTTATCCTGGAATGGATCAGATATGGCATCCGACGACAGACGTAAGTCCCATAAATCGAGGCACAGAATGCATAGATCATTGGGATCATCACATAAGACTATGAGTAGGTCCTTCTCTGGTGATTCACTGTCTAAGGGTTCTTCTGCTTCTACGCCGAATGGGTCCACGAAGGTTTATTTAAGTAAGCTGGAGATGGCTGCATTGTGGAGATATTGGCGACATTTTAATCTGGTGGATGCCGTCCCAAACCCATCAAAAGAGCAGCTGGTAGACGTTGTTCAGAGGCATTTCATGTCACAGCAAATGGACGAGTTGCAGGTCATTGTGGGATTTGTTCAAGCTGCAAAGAGGCTCAAGACTGTGTGCGATTGA 675 0.48 MLEAMEGSMNGGVPQLQSYGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDNDLEFENLSWNGSDMASDDRRKSHKSRHRMHRSLGSSHKTMSRSFSGDSLSKGSSASTPNGSTKVYLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDVVQRHFMSQQMDELQVIVGFVQAAKRLKTVCD* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2417 224 MobiDBLite consensus disorder prediction 1 25 - -
Ahy17g2417 224 MobiDBLite consensus disorder prediction 131 155 - -
Ahy17g2417 224 MobiDBLite consensus disorder prediction 102 155 - -
Ahy17g2417 224 MobiDBLite consensus disorder prediction 116 130 - -
Ahy17g2417 224 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 164 217 IPR025718 GO:0005515
Ahy17g2417 224 PANTHER SAP30 1 223 IPR024145 -
Ahy17g2417 224 PANTHER HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30 SIN3-BINDING PROTEIN 1 223 - -
Ahy17g2417 224 Gene3D - 139 224 IPR038291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2417 Ahy-Chr17 115912002 115916030 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2417 - - gmx:100809195 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2417 17 115912002 115916030 Ahy17g2417 17 115912002 115916030 ECH