Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2413 ATGGTTATGCAAGTTGGAAGCATGGAGTCAGAACTGAAAACCCTAAATTCCAAAGACCTCAAAGCCAATGGAATCTCCAAATCCAACATCGGGGATGGAGAAGGTGAAGGTGACGATCGCCCTCTGCTCAAGTCCTCCGACTCCACCAGCACCACCACCACCACATCCGACACCATTGAAGACATGGAGAAGAAATACGCCGCCTTCGTCCGCCGCGACGCGTACGGCACCATGGGCCGCGGCGACCTCCCGGCAAAGGAGAAGCTCCTCTTGGGATTCGCGCTCGTCACGCTGCTCCCCATACGAGTCGTGCTTGCTATGACCATCCTGGTGTTCTACTACGCCATCTGTCGCGTGTGCACTCTATTTTCTTCTCCTAACCGCGACGACGAGCAGGAGGATTACGCTCATATGGGCGGGTGGCGTAGGGCAGTTATTGTTCGCTGCGGGAGAGCTCTATCGAGGTCCATGCTCTTTATCTTCGGCTTCTATTGGATCCCGGAGTCTCATATCCCTGATCATCACGATGCTGATGGAAATGGAAGCTCCTTCACTCACACAAAGAATGGAGACAAAACTCAACCAGAAGTGGGAAGACCTGGCGTAGTAATATCTAATCATGTGTCGTACTTGGATATTTTGTATCACATGTCCTCTGTATTCCCCAGTTTTGTTGCTAAGAGATCTGTGTCTAAGCTTCCATTCGTCGGGCTCATCAGCAAGTGCCTTGGATGTGTCTATGTTCAGCGGGAATCAAAATCATCAGACTTCAAGGGCGTTTCAGCGATCGTCACTGAAAGAATTCGAGAAGCTCATCAAAATGAGTCTGCTCCAGTAATGATGCTATTCCCAGAAGGTACAACCACAAATGGAGAGTACCTCCTTCCATTCAAGACAGGAGGTTTTTTAGCAAAAGCACCAGTACTTCCTGTAATTTTACGATACCATTACAAGAGGTTTAGCCCTGCCTGGGATTCCATATCTGGGGTGCGTCATGTGATTTTTCTCCTATGTCAATTTGTAAATTATGTGGAGGTGATTCGGTTACCTGTTTACTATCCCTCACAGCAGGAGAAGGATGACCCTAAACTATATGCCAATAATGTTAGAAGATTGATGGCTACTGAGGGTAATTTGATACTTGCTGACATTGGACTCGCTGAAAAACGAATATATCATGCTGCTCTGAATGGTTTGTTTTCCCAATGCTAA 1212 0.4769 MVMQVGSMESELKTLNSKDLKANGISKSNIGDGEGEGDDRPLLKSSDSTSTTTTTSDTIEDMEKKYAAFVRRDAYGTMGRGDLPAKEKLLLGFALVTLLPIRVVLAMTILVFYYAICRVCTLFSSPNRDDEQEDYAHMGGWRRAVIVRCGRALSRSMLFIFGFYWIPESHIPDHHDADGNGSSFTHTKNGDKTQPEVGRPGVVISNHVSYLDILYHMSSVFPSFVAKRSVSKLPFVGLISKCLGCVYVQRESKSSDFKGVSAIVTERIREAHQNESAPVMMLFPEGTTTNGEYLLPFKTGGFLAKAPVLPVILRYHYKRFSPAWDSISGVRHVIFLLCQFVNYVEVIRLPVYYPSQQEKDDPKLYANNVRRLMATEGNLILADIGLAEKRIYHAALNGLFSQC* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2413 403 Pfam Acyltransferase 196 311 IPR002123 GO:0016746
Ahy17g2413 403 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 26 399 - -
Ahy17g2413 403 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 197 383 - -
Ahy17g2413 403 SMART plsc_2 201 316 IPR002123 GO:0016746
Ahy17g2413 403 PANTHER PHOSPHOLIPID/GLYCEROL ACYLTRANSFERASE FAMILY PROTEIN-RELATED 26 399 - -
Ahy17g2413 403 MobiDBLite consensus disorder prediction 22 57 - -
Ahy17g2413 403 MobiDBLite consensus disorder prediction 177 198 - -
Ahy17g2413 403 CDD LPLAT_LPCAT1-like 155 390 IPR045252 GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2413 Ahy-Chr17 115700060 115704125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2413 8 402 Acyl Lipid Metabolism Gene Families AT1G80950 61.671 7.69e-179 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2413 K13510 - gmx:100820536 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2413 17 115700060 115704125 Ahy17g2413 17 115700060 115704125 ECH
Ahy17g2413 17 115700060 115704125 Ahy8g0022 8 279105 283251 hybridization