Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2411 ATGCCACTCGTGTACTTTTCAAGATTGGGCACTGCAATTCAAAGTTCAAATGTAGGAATAGGTGGTGGAACCATAAGTTCTGTTGTTTTCGGTGTTCTGATTGCACGAGGGAAGTTGTTGTTTAGTACTACCAAGTTTTGTCACCCTGTAAACTTCGAAGCTTGTACCTATTTGGTTAGACAGAGAAGAACATTGTCTGTAATTGGCACACCATTTCCCACAGTGTCTATGGATTCTGCTCTCACTTCTCGCTTATCTGCAGCTGCAATCAGTGAATGCTCTGATGATAAGTTAACTTTGAGGTATCGTCGCCATTCACTGTCAAGAAAGGTTGTGAGTAATCTGTGTTTGAGGACAGGTTTGGAGAATGGTAGAAAAGTGGGCATGAAAAGCTCTTGGCAACCCGAAAATCGTACAATTTATAGCTATCTTATTGCTGCAAGGACCTTGCACTCTTCTTACCTCTGCACAGAGTTGGCATCTAGAGGTTTCCATGGATCATCATCATGCGCTATTTCAGGCCCTGCTCATGGTGTACGTCATGACACTTGTGCTTGTAAAGAGAACTCAACAAATTCTTCTATTTCATCTAAACCGAAAGCTCCTTTAGGTAAAACCCTTAAATTAGCATCTGGATCATGCTACTTACCCCATCCTGATAAGGAAGAAACCGGGGGAGAAGATGCTCATTTTATATGCTCTGAGGCACAAGCTATAGGACTGGCTGATGGTGTTGGTGGCTGGGCCGATCATGGTGTTGATGCTGGACAGTATTCTCGTGAGCTCATGTCCAATTCAGTGGCTGCTATTTCGGGGGAGTCCAAAGGTTCAATTGACCCAGCAAGGGTGTTGGAAAAAGCATACTTAAGTACAAAAGCTAAGGGTTCCTCCACAGCATGCATTATCACACTTACTGATCAGTGGCTTCATGCTATTAACTTGGGAGACAGTGGTTTTATGGTGATCCGTGATGGGTGCACTGTATTTCGGTCCCCGGTGCAGCAACATAATTTTAATTTCACTTATCAGCTGGAAAGTGGAAATAATGGCGATTTACCTAGTTCTGGTCAGGTTTTCACAATTCGTGTTGCTCTTGGTGATGTCATAGTCGCTGGTACGGATGGGTTGTTTGACAACTTGTATAATAATGATATCACGGCAGTGGTGGTTCATGCCAAAAGAGCTGGCTTAAGCCCTCAGGCAACGGCTCAGAAAATAGCTGCACTGGCACGCCAACGGGCACAGGACAAAGACCGGCAGACGCCTTTTTCAACTGCTGCTCAAGATGCTGGGCTCCGTTACTATGGTGGCAAGCTTGACGACACAACAGTTATCATTTCATATATTACCGGCTCTGAAGATGCCTAA 1368 0.4452 MPLVYFSRLGTAIQSSNVGIGGGTISSVVFGVLIARGKLLFSTTKFCHPVNFEACTYLVRQRRTLSVIGTPFPTVSMDSALTSRLSAAAISECSDDKLTLRYRRHSLSRKVVSNLCLRTGLENGRKVGMKSSWQPENRTIYSYLIAARTLHSSYLCTELASRGFHGSSSCAISGPAHGVRHDTCACKENSTNSSISSKPKAPLGKTLKLASGSCYLPHPDKEETGGEDAHFICSEAQAIGLADGVGGWADHGVDAGQYSRELMSNSVAAISGESKGSIDPARVLEKAYLSTKAKGSSTACIITLTDQWLHAINLGDSGFMVIRDGCTVFRSPVQQHNFNFTYQLESGNNGDLPSSGQVFTIRVALGDVIVAGTDGLFDNLYNNDITAVVVHAKRAGLSPQATAQKIAALARQRAQDKDRQTPFSTAAQDAGLRYYGGKLDDTTVIISYITGSEDA* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2411 455 PANTHER PROTEIN PHOSPHATASE 57 454 - -
Ahy17g2411 455 Pfam Stage II sporulation protein E (SpoIIE) 238 446 IPR001932 -
Ahy17g2411 455 SUPERFAMILY PP2C-like 214 446 IPR036457 -
Ahy17g2411 455 SMART PP2C_4 200 447 IPR001932 -
Ahy17g2411 455 PANTHER PROTEIN PHOSPHATASE 2C 57 454 IPR039123 -
Ahy17g2411 455 SMART PP2C_SIG_2 209 449 IPR001932 -
Ahy17g2411 455 Gene3D - 346 453 IPR036457 -
Ahy17g2411 455 Gene3D - 218 345 IPR036457 -
Ahy17g2411 455 ProSiteProfiles PPM-type phosphatase domain profile. 210 449 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2411 Ahy-Chr17 115685067 115689297 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2411 K17508 - gmx:100787333 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2411 17 115685067 115689297 Ahy17g2411 17 115685067 115689297 ECH
Ahy15g0765 15 10440502 10443962 Ahy17g2411 17 115685067 115689297 ECH