Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2399 ATGTCACACGAAGTTACTAACAATGACTTGCATGATGATGATACAGAATGGCAAGAGCTAAAACTTCCAAACTTGTTGTTACAGAGTGAAGCTGTTCGGCAAGTGCACGCCACCATTGAGAGAGAATGGAATTTCCTTCAAAGGTCAGCTTGTCAAACAGCAGCAGGAAGGGCTCTGTGGAAGCATGTCATCCATGATCCACTGGCTTATTTGCTGGCAGGGGAGTCTTATTTGAGAAGTCTTCATGAAAAGATGAAGAAAGACAGACTCAACAATGCACGTGAAATTTCTGGAGTTATTCTAGCTGTTAGAACTCTTTGGTTTGATTCTAGATTGGAAGATGCCCTTAATTCACCAAATGGCAGAGAATCACAAGTTGTTCTCCTTGGTGCAGGAATGGACACAAGGGCATACCGTTTAAATTGTTTACAGGACAGCGATGTATTTGAGGTTGATTTTCCAGGAGTATTACAAGTAAAAGCCACTATTTTAGAAGCAGCTAAGGAATCGACAAATGAATTTGAACACGTACGGTCAATGGCTAAATCCTTAACAAGGGTAGCTGCTGACATAAGAGAAAATGACTGGCTGGAGAAGCTTCGAACTGCAGGTTTTTTGCCACACAAGAACACGATATGGGTTCTAGAAGGTCTACTGTATTACCTCACCCATTCACAGGCCATGCAAGTGTTAAGGATTTTGGCCAACAAATGTTGTGTAACTCACACGGTCCTTTTAGCAGACTTCATGAATAAGCCATCAACTACATTGTCTAACTCCGCATTCCAGTTTTATAGCGACTGGCCAGACCAACTCTTGCCCTCCATTGGGTTCACTCATGTAAAGCTTTCTCAAATTGGAGACCCAGATGCCCATTTTGGACTATTGAATGATCCTTTGAATCTTTTCAACAAGCTTCGCAAGTTGCCTAGGTCAATAGAAACCCATCCAGATGATGGAACGCCATGCTGTCGCTTGTACTTGGTTGAAGCTTCTGGTTCACCTAAACAAGATGTTGCTCCTAATGTTCCAACGAGTGTCCCATGA 1047 0.426 MSHEVTNNDLHDDDTEWQELKLPNLLLQSEAVRQVHATIEREWNFLQRSACQTAAGRALWKHVIHDPLAYLLAGESYLRSLHEKMKKDRLNNAREISGVILAVRTLWFDSRLEDALNSPNGRESQVVLLGAGMDTRAYRLNCLQDSDVFEVDFPGVLQVKATILEAAKESTNEFEHVRSMAKSLTRVAADIRENDWLEKLRTAGFLPHKNTIWVLEGLLYYLTHSQAMQVLRILANKCCVTHTVLLADFMNKPSTTLSNSAFQFYSDWPDQLLPSIGFTHVKLSQIGDPDAHFGLLNDPLNLFNKLRKLPRSIETHPDDGTPCCRLYLVEASGSPKQDVAPNVPTSVP* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2399 348 Pfam Leucine carboxyl methyltransferase 50 233 IPR007213 GO:0008168|GO:0032259
Ahy17g2399 348 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE YKTD-RELATED 18 329 - -
Ahy17g2399 348 Gene3D Vaccinia Virus protein VP39 42 295 IPR029063 -
Ahy17g2399 348 PANTHER LEUCINE CARBOXYL METHYLTRANSFERASE 18 329 - -
Ahy17g2399 348 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 47 329 IPR029063 -
Ahy17g2399 348 TIGRFAM mthyl_TIGR00027: methyltransferase, TIGR00027 family 60 251 IPR011610 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2399 Ahy-Chr17 114852328 114854309 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2399 - - gmx:100801340 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2399 17 114852328 114854309 Ahy17g2399 17 114852328 114854309 ECH
Ahy17g2399 17 114852328 114854309 Ahy8g0037 8 589350 591364 hybridization