Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2384 ATGCTAGGAATTTTAAGGGCATTAAGACTTGGGCAAACCCCTCAAAGGGCATCCATATTCCAACAATGCCATGGAAATGGAATCATTAGCCCCAACAAATTGTCTTCTGGTTTCGGATGTGTGACATCCTCCCCACCCACCATGCAGCTGAAAGGATTGGAGAATGTTACTGTCTCAGAGGTGCTTATGACAAAAGGGCAAGAGAAGATTGGTTCCTGGCTCTCATGCCAAGTTGACGATGCTGTTATCAATGCAATGAAGAACGTTTATCAGATGGCTGAAAACAATATTGGATCATTGGTTGTACTAAAGTCAGAGGGCCACCTAGCAGGCATTGTCACAGAAAGAGATTGCTTGAAGAAAATAGTTGCACAAGGAAGATCACCCTATCACACACAAGTTGGTGAAATAATGACTAATGAGCAAAACTTGATAACGGTGACCTCTGACATGAACATTCTTCAAGCAATGCGACTTATGACAGAGAATCGTATCAGACATGTTCCAGTTATAGACGGGAAAATAGTGGGAATGATATCCATTGTAGATGTAGTTCGAGCAGTGATGGAGCAGCAAAATGGAGAATTGAAACGACTCAATGATTACATCAAAGGAGAATACTATTAG 627 0.4163 MLGILRALRLGQTPQRASIFQQCHGNGIISPNKLSSGFGCVTSSPPTMQLKGLENVTVSEVLMTKGQEKIGSWLSCQVDDAVINAMKNVYQMAENNIGSLVVLKSEGHLAGIVTERDCLKKIVAQGRSPYHTQVGEIMTNEQNLITVTSDMNILQAMRLMTENRIRHVPVIDGKIVGMISIVDVVRAVMEQQNGELKRLNDYIKGEYY* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2384 208 Pfam CBS domain 90 123 IPR000644 -
Ahy17g2384 208 Pfam CBS domain 134 189 IPR000644 -
Ahy17g2384 208 ProSiteProfiles CBS domain profile. 138 196 IPR000644 -
Ahy17g2384 208 SUPERFAMILY CBS-domain pair 87 203 IPR046342 -
Ahy17g2384 208 SMART cbs_1 79 123 IPR000644 -
Ahy17g2384 208 SMART cbs_1 143 189 IPR000644 -
Ahy17g2384 208 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX3, MITOCHONDRIAL 1 207 - -
Ahy17g2384 208 ProSiteProfiles CBS domain profile. 63 129 IPR000644 -
Ahy17g2384 208 PANTHER CYSTATHIONINE BETA-SYNTHASE (CBS) FAMILY PROTEIN 1 207 - -
Ahy17g2384 208 Gene3D - 51 207 IPR046342 -
Ahy17g2384 208 CDD CBS_pair_bac_euk 74 186 IPR044725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2384 Ahy-Chr17 114452368 114453598 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2384 - - adu:107460011 411.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2384 17 114452368 114453598 Ahy17g2384 17 114452368 114453598 ECH
Ahy17g2384 17 114452368 114453598 Ahy8g0043 8 734521 735648 hybridization