Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2342 ATGAAAATGGCCGTGAGGCTTGTCCTCTTAACATTCGCCATATGCCGGTTGATAGTCACGGTTGGGTTCACCGTGGTCCCAACCGAACTCCAGAGCCAACTCAGCGTGGACAACTCAGAAGTAGAAGCGGCTTCGGTGGATTTTGGGATGCTTGATAAAGGGGAGCCTCTGGCAGTTATGCACCCTGGTTCGGCAGATGATATAGCTCAGTTGGTTAGAGCGGCGTACGAGGGAGGGTTTTCAGTGTCTGCAAGAGGGCACGGGCACTCCATAAATGGGCAGGGATTGATAAAGAGAGGGACGAAGGGAGTGGTGATAGATATGGGGAGTAAGAAGGGTGTTGGAGGTGGTCCTCCAGCGCCAAGTGTGTGTGAGAAGGGAATGTATGTGGACGTGTGGGGTGGAGAGTTGTGGATAAATGTGTTGAAGGCCACTCTCCAGTATGGGTTGGCACCCATGTCTTGGACTGATTATTTGTACTTATCTGTGGGTGGTACCCTCTCCAACGCTGGCATCAGTGGTCAAGCCTTCCATCACGGCCCCCAAATCTCCAATGTCCATCAGCTCGATGTTGTTACAGGTAAAGGTGAGGTGTTGACGTGTTCGGAAGAGAGTAACTCAGAGTTGTTCCATGCTGTTCTTGGTGGTCTTGGTCAGTTTGGAATCATCACAAGAGCTAGAATTGCTCTCGAGCCAGCTCCACAAAGAGTTCGTTGGATACGAGTGCTGTATTCGAATTTTGCCAAGTTTACTAAGGATCAGGAGTACCTGATATCTGTGGAAGGTAACAAAGAGAGGTTGGATTATATAGAGGGGTTTGTGATAGTAGATGAAGGGTTGATCAATAATTGGAGGTCCTCTTTTTTCTCACCAAGTAACCCTGTCAAGATCAGTTCCCTCAATAAAAATGCCGATGGTGGTGTTTTATACTGCCTGGAGTTTACCAAGAATTACCACCAACATCAAGCTGATTCTATTGATCAGGAAATAGAAGCTCTATTGATAAAGTTGGATTTTATACCAGCATCGGTGTTCACAACGGACCTGCCTTATGTAGATTTTTTGGACAGAGTACATAAGGCAGAGCTCAAGCTTAGGTCCAAGGGTTTATGGGAGGTTCCCCATCCATGGCTCAACCTTTTTGTTCCAAAATCTAGAATAGTGGACTTTGACAAGGGGGTGTTCAAGGGCATTCTTGGAAATAAGACTAGTGGGCCAATTCTCATCTACCCTATGAACAAAGACAAGTGGGACCAGAGGAACTCGGTGGTGACGCCAGAGGAGGATGTGTTTTACCTGGTGGCATTTCTGAGATCAGCGCTGGACGATGAGGCGCTGGAGTACCTGAATGATCAGAACCGTCGGATCCTGGAATTCTGCAATGATGCGGAGATCAACGCCAAACAGTACCTGCCTCATTACACAACCCAACAGGAATGGATGGACCACTTTGGAGATAGGTGGGACCAATTCTACTCCAGGAAGATGCAATTCGACCCCCGGCGCATCTTAGCAACGGGCCAGAGGATCTTTGAGTTTCATCCTCATGCAAATGCAAATGCAATGCAATAG 1572 0.4784 MKMAVRLVLLTFAICRLIVTVGFTVVPTELQSQLSVDNSEVEAASVDFGMLDKGEPLAVMHPGSADDIAQLVRAAYEGGFSVSARGHGHSINGQGLIKRGTKGVVIDMGSKKGVGGGPPAPSVCEKGMYVDVWGGELWINVLKATLQYGLAPMSWTDYLYLSVGGTLSNAGISGQAFHHGPQISNVHQLDVVTGKGEVLTCSEESNSELFHAVLGGLGQFGIITRARIALEPAPQRVRWIRVLYSNFAKFTKDQEYLISVEGNKERLDYIEGFVIVDEGLINNWRSSFFSPSNPVKISSLNKNADGGVLYCLEFTKNYHQHQADSIDQEIEALLIKLDFIPASVFTTDLPYVDFLDRVHKAELKLRSKGLWEVPHPWLNLFVPKSRIVDFDKGVFKGILGNKTSGPILIYPMNKDKWDQRNSVVTPEEDVFYLVAFLRSALDDEALEYLNDQNRRILEFCNDAEINAKQYLPHYTTQQEWMDHFGDRWDQFYSRKMQFDPRRILATGQRIFEFHPHANANAMQ* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2342 523 Gene3D - 108 235 IPR016169 -
Ahy17g2342 523 ProSiteProfiles PCMH-type FAD-binding domain profile. 52 233 IPR016166 GO:0071949
Ahy17g2342 523 Gene3D - 236 470 IPR016170 -
Ahy17g2342 523 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 234 511 IPR015345 GO:0009690|GO:0019139|GO:0050660
Ahy17g2342 523 Pfam FAD binding domain 56 202 IPR006094 GO:0050660
Ahy17g2342 523 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 56 89 IPR006093 GO:0016491
Ahy17g2342 523 SUPERFAMILY FAD-linked oxidases, C-terminal domain 234 511 IPR016164 GO:0003824|GO:0050660
Ahy17g2342 523 Gene3D - 37 511 IPR016167 -
Ahy17g2342 523 PANTHER GULONOLACTONE OXIDASE 8 513 - -
Ahy17g2342 523 PANTHER CYTOKININ OXIDASE 5-RELATED 8 513 - -
Ahy17g2342 523 SUPERFAMILY FAD-binding/transporter-associated domain-like 34 232 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2342 Ahy-Chr17 113055121 113059577 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2342 K00279 - gmx:100790584 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2342 17 113055121 113059577 Ahy17g2342 17 113055121 113059577 ECH