Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2329 ATGGAGGAGGAAAACGGTTATGTTGGCAGCAGCACCTCCAACTTGGAGACTTCCAAGGCGGAGCGATCTGTGTGGCTTATGAAGTGCCCTCTTGTCGTTTCCAAGTCGTGGCAGAACCACCCTCCTTCTCAGCCACTTGCCAAGGTCGTTCTCTCCCTTGATCCTCTCCACGCCGATGACCCCTCTGCTCTTCAGTTTACGATGGAGATGGCTGGGACTGATGCTGTTAATATGCCAAAAACATATTCCCTGAATATGTTTAAAGACTTTGTACCTATGTGTGTTTTCTCAGAGACAAGCCAAGGTGGCAAGGTTGCAATGGAAGGGAAGGTTGAACATAAGTTCGATATGAAGCCCCATGGTGAAAACATTGAAGAGTATGGCAAATTGTGTCGTGAGAGAACAAACAAATCCATGATAAAAAATCGACAAATACAGGTTATTGATAATGATCGTGGAGTATTAATGAGGCCAATGCCTGGAATGATTGGTCTAGTTTCATCCAATTCAAAGGATAAGAAGAAGACACAGCCAGTTAAACAAACTGATACAAAGAGAACAAGAAGAGATAGAGGAGAACTGGAGGATATAATGTTCAAGTTATTTGAAAGACAGCCTAATTGGGCATTGAAGCAGCTTGTCCAGGAAACTGATCAACCTGCTCAATTCTTGAAAGAGATCCTGAATGAACTATGTGTATACAATAAAAGAGGTGCCAATCAAGGAACTTACGAGCTGAAGCCGGAATACAAGAAATCTGTTGTTGAAGATACAAATGCCGAATAA 786 0.4262 MEEENGYVGSSTSNLETSKAERSVWLMKCPLVVSKSWQNHPPSQPLAKVVLSLDPLHADDPSALQFTMEMAGTDAVNMPKTYSLNMFKDFVPMCVFSETSQGGKVAMEGKVEHKFDMKPHGENIEEYGKLCRERTNKSMIKNRQIQVIDNDRGVLMRPMPGMIGLVSSNSKDKKKTQPVKQTDTKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGANQGTYELKPEYKKSVVEDTNAE* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2329 261 Gene3D - 186 253 IPR036388 -
Ahy17g2329 261 MobiDBLite consensus disorder prediction 165 190 - -
Ahy17g2329 261 Pfam TFIIF, beta subunit N-terminus 21 141 IPR040504 -
Ahy17g2329 261 SUPERFAMILY Rap30/74 interaction domains 12 120 IPR011039 GO:0006367
Ahy17g2329 261 MobiDBLite consensus disorder prediction 173 190 - -
Ahy17g2329 261 SUPERFAMILY "Winged helix" DNA-binding domain 186 252 IPR036390 -
Ahy17g2329 261 PANTHER GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2 9 257 IPR003196 GO:0005674|GO:0006366|GO:0006367
Ahy17g2329 261 CDD TFIIF_beta 14 119 - -
Ahy17g2329 261 Pfam TFIIF, beta subunit HTH domain 188 251 IPR040450 -
Ahy17g2329 261 PANTHER TRANSCRIPTION INITIATION FACTOR IIF, BETA SUBUNIT 9 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2329 Ahy-Chr17 112341897 112345496 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2329 K03139 - gmx:100788473 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2329 17 112341897 112345496 Ahy17g2329 17 112341897 112345496 ECH
Ahy17g2329 17 112341897 112345496 Ahy8g0089 8 1509992 1513697 hybridization