Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2322 ATGGCAGCACAACAAGGTTCTAGATGTGAGATTGAGCTTGTGATAGAGAGAACTAGCACAACCCAACAAAACCCAAGTACCAATATGAGAACAATCGCAAAGAGCTCATTATTAATGTCCCTGAATTCCTTGCTAACAAAATTTCATGCAGGTTATTTCAGGATAAGCCTCTCACTTGGCGGCCAAGCCTTGCTATGGAAGACACTCAGCTCCGTGCCAACCACCGACGACAAGAGCAATGCTCTGCGGCGCGTCTTTCATGCGCTGCACCCCACCGTTTTCCCCATACTCTGGTCTCTAGCTCTCTTTATTCTCATATTACTCTCTCTTCTTTACATCTTAAGGTGCTTGTTTTTCTTTAAGATGGTAAAGGCCGAGTTCTTGCACCATGTAGGGGTTAATTATCTCTTCGCACCATGGATCTCGTGGCTCTTGCTTCTTGAATCCTCACCCTTCATGGCACCCAAAACCGTCCCTTACCTGGTGCTGTGGTGGTTGTTTGCCGTCCCTGTGGTGATGCTTGACGTGAAGATCTACGGGCAGTGGTTCACAAAAGGGAAGAGGTTCTTGTCGACGGTGGCAAATCCGACAAGCCAGATGTCGGTGATAGGGAACCTGGTGGGGGCACAGGCGGCGGCGCACATGGGTTGGAAGGAGAGCGCGGTGTGTTTGTTCTCGTTGGGGATGGTGCATTACTTGGTGTTGTTTGTGACGCTCTATCAGAGGCTCTCCGGCGGGGATCGCCTGCCTGTGTTGTTGAGGCCTGTTTTCTTCTTGTTTTTTGCGGCTCCGGGGGTTGCTAGCTTGGCTTGGGAATCCATTGTTGGATCCTTTGATATTGCTTCCAAGATGCTCTTCTTTCTATCCCTCTTTCTCTTCACCTCACTGATTTGCAGGCCAACACTGTTCAGGAGATCGATGAGGAGGTTCAATGTTGCATGGTGGGCTTACTCGTTTCCGGTTACAATGCTTGCTCTGGCTTCCACGGACTATGCTCAAGAAGTCAAAGGAACCATTTCTCACATTCTCATGCTCTGTCTCTTAGCTCTTTCCTTTCTCATCTGTCTTTCTCTAACTCTCTTCACTTTCCTCAACTCTAAGATGCTTCTGCCTGATAATGATCCCATTGCAAACTTGGTCATTCAATTTCCAGTAGCAGACTAG 1164 0.4837 MAAQQGSRCEIELVIERTSTTQQNPSTNMRTIAKSSLLMSLNSLLTKFHAGYFRISLSLGGQALLWKTLSSVPTTDDKSNALRRVFHALHPTVFPILWSLALFILILLSLLYILRCLFFFKMVKAEFLHHVGVNYLFAPWISWLLLLESSPFMAPKTVPYLVLWWLFAVPVVMLDVKIYGQWFTKGKRFLSTVANPTSQMSVIGNLVGAQAAAHMGWKESAVCLFSLGMVHYLVLFVTLYQRLSGGDRLPVLLRPVFFLFFAAPGVASLAWESIVGSFDIASKMLFFLSLFLFTSLICRPTLFRRSMRRFNVAWWAYSFPVTMLALASTDYAQEVKGTISHILMLCLLALSFLICLSLTLFTFLNSKMLLPDNDPIANLVIQFPVAD* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2322 387 Pfam Voltage-dependent anion channel 47 362 IPR004695 GO:0016021|GO:0055085
Ahy17g2322 387 Gene3D - 42 370 IPR038665 -
Ahy17g2322 387 PANTHER - 4 379 IPR030183 GO:0006873|GO:0008308|GO:0016021
Ahy17g2322 387 PANTHER OS11G0274300 PROTEIN 4 379 - -
Ahy17g2322 387 CDD TDT_SLAC1_like 48 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2322 Ahy-Chr17 111986343 111989270 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2322 - - gmx:100787036 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2322 17 111986343 111989270 Ahy17g2322 17 111986343 111989270 ECH
Ahy17g2322 17 111986343 111989270 Ahy8g0093 8 1598154 1600926 hybridization