Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2296 ATGTTGAAGTTCCTATCAAAAGTGAAGATCGAGTACAATGCGCTGGACCCGCGAATAGCATCGTGTATGGAGTTCATGGCACAGTGCAACTCACGCAAGGCGAGGGAATCAAACCCTGCGTGCCAGGTGGAGGTGAAGCGCCGAACCGACGAACACCCGCCGCAGATCACGGTGACCTTCGTCAACGGCGTCGAGCAAGCCTTCGATGCGACCTCAACCCCTGCACAGAGCATAAGGACCATGATTCTTGAAAAAGGCCAAACCCTAGAGACCGAGCAGATGTTCCGAGAAGCTGGTGAGTCATGGCCCGTCATCATTCCCAAAGAAGAGCTATCTCAGCCCGCACCTGGCGTCAAGCCCAGGAAAGCAGAGGAGAAGAAGCAATAG 387 0.5452 MLKFLSKVKIEYNALDPRIASCMEFMAQCNSRKARESNPACQVEVKRRTDEHPPQITVTFVNGVEQAFDATSTPAQSIRTMILEKGQTLETEQMFREAGESWPVIIPKEELSQPAPGVKPRKAEEKKQ* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2296 128 Pfam 39S ribosomal protein L53/MRP-L53 13 63 IPR019716 -
Ahy17g2296 128 Gene3D Glutaredoxin 1 101 - -
Ahy17g2296 128 MobiDBLite consensus disorder prediction 107 128 - -
Ahy17g2296 128 PANTHER 39S RIBOSOMAL PROTEIN L53, MITOCHONDRIAL 1 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2296 Ahy-Chr17 110869584 110871280 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2296 K17434 - pop:18098361 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2296 17 110869584 110871280 Ahy17g2296 17 110869584 110871280 ECH