Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2284 ATGGGAGAGAAATCGAAGTCAGGAGGGTGCTGTGGCTGGTTTATAGCCTTTTTGATTCTCGCTCTGGTGGTCGGTGCTATCGTTTACACCGTTAAGAAGAAGATCGATCACTCCCATTCCGATAAGCCACTTCCGGTACCTGGTCCTCCCGGCGCCATCGACCAGAAATATTCCTCTGCACTCAAAACTTCCATGCAATTCTTTGATATACAAAAATCTGGAAAGTTAACTGACAACAAAATATCTTGGAGAGGAGATTCGGCTCTAAAGGATGGAAGCCAAGCAAATTTGGATCTGTCAAAAGGAATGTATGATGCTGGGGATCACATGAAGTTTGGGTTTCCAATGGCTTTTACTGCTACTGTGTTATCTTGGGCTATTCTGGAATATGGAGATCAAATGGATGCTGTTGGCCAGTTGGAACCGGCCAAAGATTCCCTCAAGTGGATCACTGATTACCTTATCAATGCTCATCCTTCTCCCAATGTTCTTTATATTCAGGTGGGAAATCCTGTTTCAGATCACAAATGTTGGGATAGGCCTGAATCCATGACTGAACCACGGCCTCTCACACAGATTAATGCATCTAGCCCTGGATCAGATGTTGCAGCTGAAACTGCAGCAGCAATGGCCTCGGCATCTTTGGTCTTCAAAAAGAGTGATTCTACATATTCAAGCACTCTCCTCAAGCATGCAAAGGAATTGTTTACTTTTGCAGATAAAAATAGAGGAATATATAGCGAGACTATACCTGATGTTGCAACATACTATAACTCAACTGGATACGGTGATGAACTTTTATGGGCAGCTAGCTGGCTCTATCATGCTACGGATGATGATTCTTACCTTAAGTATGTGACTGGTCAAAATGGAGAAGATTATGCACAATGGGGAAGTCCAACCTGGTTCAGTTGGGACAACAAGCTTGCTGGAACTCAGGTTTTGTTATCCAGATTAAGCTTCTTTAAGGCAAAGGACATTTCAAGCTCATACGGTTCTGGCCTACAAAATTACAGGAAATCAGCTGAGGCTGTAATGTGTGGCCTTCTTCCAGATTCTCCAACAGCCACAAAAAGCAGAACAGACAAGGGCCTCATATGGGTTAGTGAGTGGAATGCTCTGCAGCATCCTGTTGCTTCTGCATTCTTGGCTGCTATTTACAGTGACTACATGCTTACATCACAGACCGCAAAACTAAAATGTGATTCCAGTTCTTATAGCCCATTAGATCTTCGAGACTTTGCCAAATCTCAGGCTGACTACGTACTGGGGAAGAACCCTATGCATATGAGTTTTCTAGTGGGATATGGAGATAAATACCCGCAATTTGTACATCACAGGGGTGCTTCGATCCCTGCTGATGCAAAAACTGGCTGCAAAGATGGCTTCCAGTGGCTCGACTCAACTGATCCTAATCCCAATGTTGCTACTGGAGCACTTGTTGGTGGACCATTCTTGAATGAGACTTTTATTGATTCCAGGAACAATTCTATGCAAACAGAACCAAGCACATATAACAGTGCTGTAATAGTTGGCCTGTTATCAAGTTTAGTCACCACATCTTCTATCGCTCAATCTCTTAAGTAA 1587 0.4335 MGEKSKSGGCCGWFIAFLILALVVGAIVYTVKKKIDHSHSDKPLPVPGPPGAIDQKYSSALKTSMQFFDIQKSGKLTDNKISWRGDSALKDGSQANLDLSKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDAVGQLEPAKDSLKWITDYLINAHPSPNVLYIQVGNPVSDHKCWDRPESMTEPRPLTQINASSPGSDVAAETAAAMASASLVFKKSDSTYSSTLLKHAKELFTFADKNRGIYSETIPDVATYYNSTGYGDELLWAASWLYHATDDDSYLKYVTGQNGEDYAQWGSPTWFSWDNKLAGTQVLLSRLSFFKAKDISSSYGSGLQNYRKSAEAVMCGLLPDSPTATKSRTDKGLIWVSEWNALQHPVASAFLAAIYSDYMLTSQTAKLKCDSSSYSPLDLRDFAKSQADYVLGKNPMHMSFLVGYGDKYPQFVHHRGASIPADAKTGCKDGFQWLDSTDPNPNVATGALVGGPFLNETFIDSRNNSMQTEPSTYNSAVIVGLLSSLVTTSSIAQSLK* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2284 528 Gene3D - 54 521 IPR012341 GO:0005975
Ahy17g2284 528 PANTHER ENDOGLUCANASE 2 7 527 - -
Ahy17g2284 528 SUPERFAMILY Six-hairpin glycosidases 55 519 IPR008928 GO:0005975
Ahy17g2284 528 Pfam Glycosyl hydrolase family 9 57 514 IPR001701 GO:0004553|GO:0005975
Ahy17g2284 528 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 421 447 IPR018221 -
Ahy17g2284 528 PANTHER ENDO-1,4-BETA-GLUCANASE 7 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2284 Ahy-Chr17 110420971 110425036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2284 1 528 Glycoside Hydrolase AT1G75680 71.267 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2284 - - gmx:100812226 954.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2284 17 110420971 110425036 Ahy17g2284 17 110420971 110425036 ECH
Ahy17g2284 17 110420971 110425036 Ahy8g0120 8 2288635 2292845 hybridization