Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2227 ATGTTTGATAGTTCTTTTCATTATGTGATGGTGAGTTCCTTCGATGTTGCTTTCGTGGAGGACCGAGCATCCCAGGCGAAGGACAAGTGTCACCTAAACCGTTCATCTAGCATTTACTCTTTGCTTTGTACACGTGGCCTATTATTGCCTACAAACAGTGGGCCATTTCGGTGCCATGTCCCTTTCGTGAATCTGGAAGGGACTCGATTCTATCCGCTTCTCTTCTCTTCCCTTCTTAGTACCTCGGTGAAAGTTTCTGATCTTGAAGGAAAAGTAGTGGGCCTATTTTTCGGTGCCAACTGGTACCCACCATGCCGTGGATTCACCCAAATGCTAGTTGGAATCTACGAGGAGCTGAAAAGCAGTGTCCCTCAACAATTTGAGATTGTGTATGTGTCCTCTGACGAGGATTTGGACGCCTTTAATGGCTTCTATGGAACCATGCCGTGGCTTGCAATTCCATTCTCAGATTTGGAAACGAAGAAAGCCTTGAACAGAAAGTATGACGTGGAAGGCATTCCATGCTTGATTATGTTGCAACCCGATGGAAGCAAAGACGATGCGACAATTCGCGATGGGGTTGAACTTATATATCGCTATGGAATCCAAGCTTATCCTTTTAGTAAGGAGAGGTTGGAGCAGTTGCACGAGCAAGAGAGAGAGAAGCGTGAGAACCAGACTCTCACTAATTTACTTGCTAACCAGCATAGAGACTATGTTTTGGGCCAATCCGGACTCATTCAGGTACCTATTGCATCTTTAGTGGGTAAAACTGTTGGACTCTACTTTTCAGCGGAATGGTGCGTGCCATGCGCGAAGTTCACTCCGAAACTAATTTCCATTTATCACAAGATCAAGCAGGAGCTAAGTGAAAAGGGTTCAGAGGAAGACTTTGAAATAGTGCTGGTTTCCCACGACCGTGACAAAGCATCATTTGACTCTTACTACGGTACCATGCCATGGCTAGCTTTGCCTTTTGGGGACCCAGAGATCAAGAACCTCGCTAGGCACTTCGATGTGCAAGGGATTCCTTGCTTGGTAATCATAGGTCCCACTGGTAAAACCATAACGGGGCACGGGAGGAACTTAATAAACTTGTACCAAGAGAATGCATACCCTTTCACCGGTGAGAAAGTGCTACAGCTGGAGAAACAACTAACTGAAGAGGCGAAGGGGCTTCCGAGATTGGTGCGCCATGAAGGGCATAGACATGAGCTGAATTTGGTGTCTGATGGGAATGGAGGTGGGCCATTCATATGCTGTGTGTGTGATGAACAAGGATCTAATTGGGCCTACCAGTGTCTCGAATGTGGCTATGAAGTGCATCCAAGGTGCGTTACTAATGCTCCAGAACGTGACAATAATGTCGTCGTGGGAAGATGA 1383 0.4642 MFDSSFHYVMVSSFDVAFVEDRASQAKDKCHLNRSSSIYSLLCTRGLLLPTNSGPFRCHVPFVNLEGTRFYPLLFSSLLSTSVKVSDLEGKVVGLFFGANWYPPCRGFTQMLVGIYEELKSSVPQQFEIVYVSSDEDLDAFNGFYGTMPWLAIPFSDLETKKALNRKYDVEGIPCLIMLQPDGSKDDATIRDGVELIYRYGIQAYPFSKERLEQLHEQEREKRENQTLTNLLANQHRDYVLGQSGLIQVPIASLVGKTVGLYFSAEWCVPCAKFTPKLISIYHKIKQELSEKGSEEDFEIVLVSHDRDKASFDSYYGTMPWLALPFGDPEIKNLARHFDVQGIPCLVIIGPTGKTITGHGRNLINLYQENAYPFTGEKVLQLEKQLTEEAKGLPRLVRHEGHRHELNLVSDGNGGGPFICCVCDEQGSNWAYQCLECGYEVHPRCVTNAPERDNNVVVGR* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2227 460 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 401 453 IPR002219 -
Ahy17g2227 460 SUPERFAMILY Cysteine-rich domain 392 448 IPR046349 -
Ahy17g2227 460 PANTHER THIOREDOXIN 80 445 - -
Ahy17g2227 460 SMART c1_12 402 451 IPR002219 -
Ahy17g2227 460 Pfam Thioredoxin-like 256 354 IPR012336 -
Ahy17g2227 460 Pfam Thioredoxin-like 90 184 IPR012336 -
Ahy17g2227 460 ProSiteProfiles Thioredoxin domain profile. 47 199 IPR013766 -
Ahy17g2227 460 SUPERFAMILY Thioredoxin-like 245 356 IPR036249 -
Ahy17g2227 460 Gene3D Glutaredoxin 76 208 - -
Ahy17g2227 460 Gene3D Glutaredoxin 234 375 - -
Ahy17g2227 460 SUPERFAMILY Thioredoxin-like 71 185 IPR036249 -
Ahy17g2227 460 Gene3D - 410 452 - -
Ahy17g2227 460 ProSiteProfiles Thioredoxin domain profile. 217 388 IPR013766 -
Ahy17g2227 460 Coils Coil 209 229 - -
Ahy17g2227 460 Pfam C1 domain 401 446 IPR004146 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2227 Ahy-Chr17 107404530 107409282 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2227 K17609 - gmx:100815038 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2227 17 107404530 107409282 Ahy17g2227 17 107404530 107409282 ECH
Ahy17g2227 17 107404530 107409282 Ahy8g0153 8 2862661 2867578 hybridization