Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2215 ATGCCTTCAATCATTGTTGGAGATGATAAACCCTATTCTTTGAGCCTCAATCCCATTCTTTCTGCGTCAGGGGTGAAGGGCAAACCAGTAGCTTCATTATGCCAAGAAAGTGATGGCATCCTTGGTTACATTCAATCAGTGATTCACGAGAAACCAGAAACTGAATCACCATTTATGGTTCTTGATTTAGGGGTGGTGATGGACCTCATGGACCACTGGTCCAGAATGCTTCCAACGGTTCAACCATTCTATGCGGTGAAATGCAACCCTAACCCATCCCTGCTTGGAACACTGGCAGCACTGGGTTCCAGTTTCGACTGCGCCAGCAAAGCAGAGATAGAAGCCGTGTTGACCCTTGGCGTCTCGTCGGATCGAATCATCTACGCTAACCCATGCAAATCAGCGTCCCACATTACTTACGCTGCAAGCGTTGGAGTCAACATCACAACCTTTGACTCTAAAGAAGAGGTAAAAAAGATTCGAAAATGGCACCCAAACTGCCAGCTTCTCCTTCGTATAAAACCGCCACAAGACAGTGGAGCGCGAAACTCCTTGGGTTTAAAATACGGTGCACTACTGGAGGAAGTTCCAGTGCTACTCCAGGCTGCACATGATGCAGGATTAACTGTCATCGGAGTTTCCTTCCACATTGGGAGCGGAGGAGCTGACGCTAAAGCATATCACGGAGCCATTGCTGCTGCGAAGGGTGTGTTAGAAACGGCTTCAAAACTAGGCATGCCAAAGATGCACGTGCTCGATATTGGTGGCGGTTTCAGTTCTGGCACAGAGTTCGATGCGGCTGCAATTCACGTGAACGATGCTCTTGAAGCCAACTTCGGAAACGAAGAGGGCATTACGGTAATTGGCGAGCCTGGCCGTTATTTTGCTGAAACGGCTTTTACGTTGGCAACAAAAGTAATCGGGAAGCGCGTGAGAGGAGAGTTGAGAGAGTACTGGATCAACGACGGGATTTATGGATGTTTGAACTGCATAATGTTTGATTTCGCGCGCGTCACGTGCACGCCACTCAGGTGCAGCTCAAAACATGACGGGGAGAATGAGTCCAAAACTTACTCTTCAACTGTGTTTGGACCAACATGTGATTCCTTAGATACAGTGCTAAGAGATCACCAGCTTATGGAGTTGGAATTGGAAGATTGGCTTGTTTTCCCTAAAATGGGGGCGTATACTATTTCTTCAGGTACCAACTTCAATGGGTTTAGCACATCAGCCATTCCGACATACCTTACATATTCAGCTACCGTCGTCCAAGAAAAAACTAATATGTTCTAA 1293 0.4718 MPSIIVGDDKPYSLSLNPILSASGVKGKPVASLCQESDGILGYIQSVIHEKPETESPFMVLDLGVVMDLMDHWSRMLPTVQPFYAVKCNPNPSLLGTLAALGSSFDCASKAEIEAVLTLGVSSDRIIYANPCKSASHITYAASVGVNITTFDSKEEVKKIRKWHPNCQLLLRIKPPQDSGARNSLGLKYGALLEEVPVLLQAAHDAGLTVIGVSFHIGSGGADAKAYHGAIAAAKGVLETASKLGMPKMHVLDIGGGFSSGTEFDAAAIHVNDALEANFGNEEGITVIGEPGRYFAETAFTLATKVIGKRVRGELREYWINDGIYGCLNCIMFDFARVTCTPLRCSSKHDGENESKTYSSTVFGPTCDSLDTVLRDHQLMELELEDWLVFPKMGAYTISSGTNFNGFSTSAIPTYLTYSATVVQEKTNMF* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2215 430 ProSitePatterns Orn/DAP/Arg decarboxylases family 2 signature 2. 242 259 IPR022657 -
Ahy17g2215 430 Gene3D Lyase, Ornithine Decarboxylase; Chain A, domain 1 52 413 IPR009006 GO:0003824
Ahy17g2215 430 Gene3D Alanine racemase 66 295 IPR029066 -
Ahy17g2215 430 Pfam Pyridoxal-dependent decarboxylase, C-terminal sheet domain 297 394 IPR022643 GO:0003824
Ahy17g2215 430 ProSitePatterns Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 84 102 IPR022653 -
Ahy17g2215 430 CDD PLPDE_III_ODC 55 415 - -
Ahy17g2215 430 Pfam Pyridoxal-dependent decarboxylase, pyridoxal binding domain 67 296 IPR022644 GO:0003824
Ahy17g2215 430 PRINTS Ornithine decarboxylase signature 381 394 IPR002433 GO:0006596
Ahy17g2215 430 PRINTS Ornithine decarboxylase signature 82 109 IPR002433 GO:0006596
Ahy17g2215 430 PRINTS Ornithine decarboxylase signature 322 335 IPR002433 GO:0006596
Ahy17g2215 430 PRINTS Ornithine decarboxylase signature 156 178 IPR002433 GO:0006596
Ahy17g2215 430 PRINTS Ornithine decarboxylase signature 56 80 IPR002433 GO:0006596
Ahy17g2215 430 PRINTS Ornithine decarboxylase signature 126 150 IPR002433 GO:0006596
Ahy17g2215 430 PRINTS Ornithine decarboxylase signature 361 371 IPR002433 GO:0006596
Ahy17g2215 430 PANTHER ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE 36 422 IPR002433 GO:0006596
Ahy17g2215 430 SUPERFAMILY PLP-binding barrel 56 299 IPR029066 -
Ahy17g2215 430 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 287 306 IPR000183 GO:0003824
Ahy17g2215 430 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 207 220 IPR000183 GO:0003824
Ahy17g2215 430 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 104 116 IPR000183 GO:0003824
Ahy17g2215 430 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 84 102 IPR000183 GO:0003824
Ahy17g2215 430 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 394 407 IPR000183 GO:0003824
Ahy17g2215 430 PANTHER ORNITHINE DECARBOXYLASE-LIKE 36 422 - -
Ahy17g2215 430 SUPERFAMILY Alanine racemase C-terminal domain-like 280 424 IPR009006 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2215 Ahy-Chr17 106468778 106470236 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2215 K01581 - gmx:547682 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2215 17 106468778 106470236 Ahy17g2215 17 106468778 106470236 ECH