Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2158 ATGGAGTCCAACTTCAACATTATGGTATCATTAGAAGAAGAGAATGAGACTGTGAAGCAGAGAATCACACAAGGGATGCCACTCCTCACTCCATACAACATGGGAAGATTCAATCTCTCTCACAGGGTAGTTTTAGCACCATTAACAAGAACAAGGTCCTACAACTTTGTGGCTCAGCCGCATGCTGCTCTTTATTATTCTCAAAGAACGACGAAAGATGGCTTTTTGATTGGAGAAGCTTCGGGAATATCAGAAACTGCGCAAGGGTACCCAAATACTCCCGGCATTTGGACAAGAGAGCAGGTGGAAGCATGGAAACCAATAGTGAAAGCCGTTCATGAGAAAGGAGGAATATTCTTTTGCCAACTATGGCATGCTGGAAGAGTCTCCAATTATGGTTACCAGCCAAATGGGGAGGCCCCAATTTCATGCACAGACAAAGCTATTCAAAAGGAGGGATTCAGCAGGTACCCACCTCCTCGCCGCCTTAGAACTGATGAGATCCCTCACATTGTCAATCACTTCGTAGTGGCAGCCAGAAATGCCATGGAAGCTGGTTTTGACGGGGTAGAGATACATGGAGCGAATGGGTACTTGCTTGATCAGTTTTTAAAGGACAAAGTCAACGACAGAGATGACGAGTACGGAGGAACCTTAGAAAATCGTTGTCGGTTCCCACTGCAAGTGGCGGAGGAAGTAGCCAAAGAGATCGGAGCTGACAAGGTTGGTTTTAGGCTCTCCCCATTTTCAGATTACTGTGACTGTGGGGACTCTGACCCACTAGCATTGGGCATCCACATGGCCAAGTCACTGGGCCAATTGGACGTACTTTATTGCCACGTCATTGAGCCCAGGATGGTCACAATGCTTGAAAAGTCTGACACCGCAAAGGAGTCCCTTTTGCCCATTAGAAAGGCTTTCAACGGAACCTTCATTGTTGCTGGTGGCTACAATAGGAGTGATGGGAACAAGGTCTTAGCAAGTGGCGGTGCTGATTTGGTGGCGTATGGACGCCTCTTCTTGGCAAACCCTGATTTGCCAAAGAGGTTTGAATTGGATGCTGAGTTGAATAAGGCTAATAGAAGCACTTTCTACACCCATGATCCTGTGGTTGGATACACTGACTATCCATTTCTTGAAGATCATCAACCAAACGGAAAGTAG 1164 0.4656 MESNFNIMVSLEEENETVKQRITQGMPLLTPYNMGRFNLSHRVVLAPLTRTRSYNFVAQPHAALYYSQRTTKDGFLIGEASGISETAQGYPNTPGIWTREQVEAWKPIVKAVHEKGGIFFCQLWHAGRVSNYGYQPNGEAPISCTDKAIQKEGFSRYPPPRRLRTDEIPHIVNHFVVAARNAMEAGFDGVEIHGANGYLLDQFLKDKVNDRDDEYGGTLENRCRFPLQVAEEVAKEIGADKVGFRLSPFSDYCDCGDSDPLALGIHMAKSLGQLDVLYCHVIEPRMVTMLEKSDTAKESLLPIRKAFNGTFIVAGGYNRSDGNKVLASGGADLVAYGRLFLANPDLPKRFELDAELNKANRSTFYTHDPVVGYTDYPFLEDHQPNGK* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2158 387 Pfam NADH:flavin oxidoreductase / NADH oxidase family 28 354 IPR001155 GO:0010181|GO:0016491
Ahy17g2158 387 CDD OYE_like_FMN 27 361 - -
Ahy17g2158 387 PANTHER 12-OXOPHYTODIENOATE REDUCTASE-LIKE PROTEIN 24 382 - -
Ahy17g2158 387 Gene3D Aldolase class I 14 383 IPR013785 -
Ahy17g2158 387 SUPERFAMILY FMN-linked oxidoreductases 27 380 - -
Ahy17g2158 387 PANTHER NADH OXIDOREDUCTASE-RELATED 24 382 IPR045247 GO:0010181|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2158 Ahy-Chr17 103203985 103210197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2158 16 380 Acyl Lipid Metabolism Gene Families AT1G76690 67.655 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2158 K05894 - gmx:100790284 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2158 17 103203985 103210197 Ahy17g2158 17 103203985 103210197 ECH