Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2138 ATGCTGAGGTTCGCTTTGACTCTTCTTTTGTTTACGCTTGCATTCGGCGTTCTATCCTCCTCCCCGGTCTTCTCCGATCTAATCCTCGCCAAGGTTGACCGTCGCATTGATTTGACATCTCAAATTGTGCGCATAACTACCTCACTCAAGGTAGAGAATGCGGGATCAAACCCTATCTCCGAGATCTTGTTGTCCTTTCCTGAAAATCAGGCAAAGCACCTGGCATACTTGACAGCAACACTTAATGAAGGAAAGGGGAAAGGGAAAGCATCTTCTGGTGCTGGTTTACCCACTGAAGTTGTTATCCCTAAAGATGTGCCTGATTCCTTGACATTTTATTCCCTATCTTTACCCAAGGGGCTTGGGAAGGGAGAGAGTTTGCTGTTGGATGTCTTGGCTGTTTTTACCCATGCGTTGGAACCATTTCCTGAGAAAATTAGTCAAGCTGATATCCAGCTTTTACTGTTTCAAGATACTGCACACTTTCTTTCTCCTTATAAAGTAATGGTCCAGTCACTCGCTGTTAAATTGCCCGAAGCAAGAGTTGAGTCCTACACAAAACTTGAGGGCACAAAACTGTCTGGATCTGAGTTGAAATATGGCCCGTTCCATAATATTCCACCATTTTCATACTTGCCAATAATTATTCACTTTGAGAATAATCAACCCTTTGCAGTTGCTGAAGAGTTAGTGCGAGAGATCGAGATTTCCCATTGGGGAAATGTACAGGTCACAGAGCATTACAATCTCTTTCATGGTGGTGCCAAGAGTAAAGGAGAATTTTCTAGACTTGACTATCAGGCCAGGCCATATGTAAGAGGTGCATCAGCCTTTAGGCGTCTTGTTGCAAGGCTGCCGCCACGAGCTCATTCAGTTTACTACAGGGATGAAATTGGAAACATTTCCACTTCTAGTTTATGGGGTGACTCAAAGAAGACAGAACTGGAGATTGAACCTAGGTACCCTTTGTTTGGTGGATGGAGAACTGCTTTTACGATTGGATATGGTTTGCCATTGCGGGACTTCCTATTCGAATCGGATGGAAAACGTTTCCTTAATTTTTCTTTTGGTTCCCCTATAAATGAGCTAGTGATTGACACTCTCATTGTGAAGGTTGTTCTACCAGAAGGGTCCAAAGATATTTCTGCGTCTGTTCCATTTCCGGTGAAACAATGGCAGGAGACAAAGTTTTCCCACTTGGATCTTGTTGGTAGACCTGTTGTTGTGCTGGAAAAGAACAATGTTGTGCCTGAGCATAATGAGCACTTTCAGGTCTATTATAAATTTAACAGTCTCTCCATGCTCAGGGAGCCTCTGATGTTGATCTTTGGGTTTTTCTTTCTCTTTGTTGCCTGCATTGTCTACATGCATGCGGATTTGTCAATCTCCAAATCATCTGCATCTTATTTGGCTAAGGTCCAGTGGGAAGAGGTGCAAGCAACTGTTCAGCAGATCCATAATATCATTAGCCATTGCTTAACAGCACATGACAAGCTAGAAGCATCATTGCGTGATCTTTCTAGGACAGGAGATGTTCAAGCTTGTAAAGCAACTAGAAAATCAGTTGATAGCTTGTTGAAAGGGGTTTCTAAAGACTTGAAGCCTCTGGTGACATTCTTGCAATCTTCTCCACAAGCAGCTCATATACTGCCCAAGGTGGAAGAACTGATTGCTAAGGAGAGAGATTTGCAGGAGAGACTCATGGCAAAACACACAACAGTTGTAGACTGCTACGAGAAGAAGTTAGGAGGAAGGGAAATTGAGAATCGGATTGCTTCAAATCAGCAGAAAATTACCTCTTTGAGGCAGGAGGTTGATGACCTCATGGATTTTATCGATGAGATATGA 1848 0.4302 MLRFALTLLLFTLAFGVLSSSPVFSDLILAKVDRRIDLTSQIVRITTSLKVENAGSNPISEILLSFPENQAKHLAYLTATLNEGKGKGKASSGAGLPTEVVIPKDVPDSLTFYSLSLPKGLGKGESLLLDVLAVFTHALEPFPEKISQADIQLLLFQDTAHFLSPYKVMVQSLAVKLPEARVESYTKLEGTKLSGSELKYGPFHNIPPFSYLPIIIHFENNQPFAVAEELVREIEISHWGNVQVTEHYNLFHGGAKSKGEFSRLDYQARPYVRGASAFRRLVARLPPRAHSVYYRDEIGNISTSSLWGDSKKTELEIEPRYPLFGGWRTAFTIGYGLPLRDFLFESDGKRFLNFSFGSPINELVIDTLIVKVVLPEGSKDISASVPFPVKQWQETKFSHLDLVGRPVVVLEKNNVVPEHNEHFQVYYKFNSLSMLREPLMLIFGFFFLFVACIVYMHADLSISKSSASYLAKVQWEEVQATVQQIHNIISHCLTAHDKLEASLRDLSRTGDVQACKATRKSVDSLLKGVSKDLKPLVTFLQSSPQAAHILPKVEELIAKERDLQERLMAKHTTVVDCYEKKLGGREIENRIASNQQKITSLRQEVDDLMDFIDEI* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2138 615 Pfam Ribophorin I 30 455 IPR007676 GO:0006486|GO:0016021
Ahy17g2138 615 Coils Coil 584 604 - -
Ahy17g2138 615 PANTHER RIBOPHORIN I 6 593 IPR007676 GO:0006486|GO:0016021
Ahy17g2138 615 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 1 6 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2138 Ahy-Chr17 102694916 102699953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2138 21 553 Miscellaneous Gene Families AT1G76400 66.041 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2138 K12666 - gmx:100817203 984.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2138 17 102694916 102699953 Ahy17g2138 17 102694916 102699953 ECH