Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2122 ATGGCTTCCGTTTCGTGGTTCTGTTGTCTTCAAATGCGACCTACGCCATGCCACTCCACCACACCCTTCGCCGCACCCATAACAACACTTCACCAACAACACCACAACCCATCTTCACTTTCTTCTACCGGAGAGGAAGGATCATCACATGGTGTTCATAGAAGACAGCTACTTGTTCACACGGCAGCCGCAGCTGCATTATTAGCACCCGCAGCACTTGTTCCAAATGCATCAGCACTCAATGATTGGCAAGTAGGAACAGGAGAGCCCGATGGGTTTAAATCGATTACCGCTTTCTACCCGCAAGAGGCTTCCAATTCCAATGTGAGCGTTGCCATCACAGGGGTGGGTCCGGATTTTACTAAGATGGAATCGTTTGGTAAAGTGGAAGAATTTGCCGAGACCCTGATTGGTGGATTGGACAGAAGCTGGCAAAGACCACCGGGTGTGGCTGCCAAACTCATAGATTGTAAATCATCCAAGGGGTTTTATTACATAGAGTATTCGCTGCAAAATCCGGGTGAGAGTCGCAGAACCTTATATTCTGCTATTGGAATGGCATCAAATGGTTGGTATAACAGACTCTACACGGTGACAGGACAGTTTGTAGAAGAGGAAACTGACAAGTATGCTTCCAAAGTGAAAAAGGCTGTTGCATCATTTAGGTTCATATGA 675 0.4696 MASVSWFCCLQMRPTPCHSTTPFAAPITTLHQQHHNPSSLSSTGEEGSSHGVHRRQLLVHTAAAAALLAPAALVPNASALNDWQVGTGEPDGFKSITAFYPQEASNSNVSVAITGVGPDFTKMESFGKVEEFAETLIGGLDRSWQRPPGVAAKLIDCKSSKGFYYIEYSLQNPGESRRTLYSAIGMASNGWYNRLYTVTGQFVEEETDKYASKVKKAVASFRFI* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2122 224 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 3, CHLOROPLASTIC 81 224 - -
Ahy17g2122 224 Pfam PsbP 81 223 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Ahy17g2122 224 PANTHER - 81 224 - -
Ahy17g2122 224 MobiDBLite consensus disorder prediction 31 47 - -
Ahy17g2122 224 MobiDBLite consensus disorder prediction 31 52 - -
Ahy17g2122 224 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 81 223 - -
Ahy17g2122 224 SUPERFAMILY Mog1p/PsbP-like 81 223 IPR016123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2122 Ahy-Chr17 101968679 101970559 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2122 - - gmx:100785276 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2122 17 101968679 101970559 Ahy17g2122 17 101968679 101970559 ECH