Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1990 ATGCACAATAAAGAGAAAGTAATAAAGTCGCATGCGCGCCTCACCCTCTATATATACAGTTTCTTTCTGCACTTATTGAAAGCCTTAGACAAGAGTAGAGAAGTAGATAAACGAAATATATTAATGGCAGCAGGGGGATTCGCCATTGATGCTTCGGCTAACGGATTCGATGGTAGGATCACATTCTCCGTTGTCATCACTTGTATTGTTGCTGCATCCGGTGGACTCATTTTTGGATATGACATTGGGATTTCGGGAGGTGTAACAACTATGAGACCGTTTCTTGAAAAATTCTTTCCAGCAATACTTAGAAAAGCTGCTAGTGCGGAAACAAACGTATACTGCGTGTATGATAGTCAAGTATTGACATTGTTCACGTCCTCCCTCTACCTGGCGGGGCTGGTGTCGTCTCTTCTAGCTAGCCGAGTCACCACGGCATTGGGCCGGAGAAACACCATGATCTTGGGTGGTTGTATCTTCTTCGCCGGTGGGGTCATTAATGGTAGCGCTGAAAATATCGTCATGCTCATATTGGGTCGCATCTTGTTAGGCTTTGGAGTTGGTTTTACTAATCAAGCCACTCCAGTGTACCTGTCTGAAATTGCACCACCTAAATGGCGAGGTGCCTTCAACACAGGCTTCCAATTCTTCATCGGAGTCGGCGTGGTGGCCGCGAACCTTATAAACTACTTCACAGCAAACCACTCGTGGGGCTGGCGACTCTCTCTCGGCCTCGCCGCCGTCCCAGCCACCTTCATGACTGTCGGAGCATTCCTCATCCCCGACACCCCGAGCAGCTTAGTAGAACGTGGCAAAATAGACCAAGCACGACAAGCGTTACAGAAAGTAAGAGGCCACACAACAAATGTGGGACCCGAACTAGAAGAACTGATTCGGTTTTCGAAAACCGCCATGATGGATCAAGAGAGATTCGTAACCATATTTGAGAGGCAGTATAGGCCTCAGCTGGTTATGGCTTTTGCTGTGCCATTGTCTCAGCAACTTACTGGGATCAATATCGTTGCATTCTATGCGCCTAATTTGTTTCAGTCTGTGGGATTTGGTAACCGCTCCGCTTTGCTTTCAGCTGTTATATTGGGACTCGTCAACCTTGGTTCCATACTGGTGTCTGCTTCCATTGTTGACCGATTTGGTCGCAGATTCTTGTTCATTGCTGGTGGTATTCAAATGCTTCTCTGCATGACTGCAGTGGGTGTGGTGTTAGCACTAGTGAGTGGCGTTGAAGGCACAGAAAGCATTTCGAAGGGGAACACTATACTCATATTGGTGCTGCTCTGCTTCTACGCCGCAGGATTCGGTTGGTCATGGGGCCCCCTCTGCTGGCTGATTCCTAGTGAGATCTTCCCCTTAAAGATCAGGTCTCCTGGCCAAAGCATTGCCGTTGCAGTTCAGTTATTAACGGTCTTTATTTTATCCCAAACGTTCTTGAGAATGCTATGTCACTTTAAGTTTGGGACGTTCCTGTTCTATGCGGCTTGGATTGCACTGATTACTATCTTCATTATTCTGTTCATGCCTGAGACCAAGGGGATTCCGTTGGATTCCATGTATATCATATGGGGAAAACATTGGTATTGGCGTCGGTTCGTTGTTGAACCACAAGTTAATCAATAA 1635 0.4679 MHNKEKVIKSHARLTLYIYSFFLHLLKALDKSREVDKRNILMAAGGFAIDASANGFDGRITFSVVITCIVAASGGLIFGYDIGISGGVTTMRPFLEKFFPAILRKAASAETNVYCVYDSQVLTLFTSSLYLAGLVSSLLASRVTTALGRRNTMILGGCIFFAGGVINGSAENIVMLILGRILLGFGVGFTNQATPVYLSEIAPPKWRGAFNTGFQFFIGVGVVAANLINYFTANHSWGWRLSLGLAAVPATFMTVGAFLIPDTPSSLVERGKIDQARQALQKVRGHTTNVGPELEELIRFSKTAMMDQERFVTIFERQYRPQLVMAFAVPLSQQLTGINIVAFYAPNLFQSVGFGNRSALLSAVILGLVNLGSILVSASIVDRFGRRFLFIAGGIQMLLCMTAVGVVLALVSGVEGTESISKGNTILILVLLCFYAAGFGWSWGPLCWLIPSEIFPLKIRSPGQSIAVAVQLLTVFILSQTFLRMLCHFKFGTFLFYAAWIALITIFIILFMPETKGIPLDSMYIIWGKHWYWRRFVVEPQVNQ* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1990 544 Pfam Sugar (and other) transporter 68 526 IPR005828 GO:0016021|GO:0022857|GO:0055085
Ahy17g1990 544 Gene3D MFS general substrate transporter like domains 57 530 IPR036259 -
Ahy17g1990 544 ProSitePatterns Sugar transport proteins signature 2. 182 207 IPR005829 GO:0016021|GO:0022857|GO:0055085
Ahy17g1990 544 SUPERFAMILY MFS general substrate transporter 68 520 IPR036259 -
Ahy17g1990 544 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 44 540 IPR045262 GO:0015144
Ahy17g1990 544 TIGRFAM SP: MFS transporter, sugar porter (SP) family 63 521 IPR003663 GO:0016020|GO:0022857|GO:0055085
Ahy17g1990 544 ProSiteProfiles Major facilitator superfamily (MFS) profile. 67 516 IPR020846 GO:0022857
Ahy17g1990 544 PRINTS Sugar transporter signature 333 343 IPR003663 GO:0016020|GO:0022857|GO:0055085
Ahy17g1990 544 PRINTS Sugar transporter signature 75 85 IPR003663 GO:0016020|GO:0022857|GO:0055085
Ahy17g1990 544 PRINTS Sugar transporter signature 452 464 IPR003663 GO:0016020|GO:0022857|GO:0055085
Ahy17g1990 544 PRINTS Sugar transporter signature 429 450 IPR003663 GO:0016020|GO:0022857|GO:0055085
Ahy17g1990 544 PRINTS Sugar transporter signature 177 196 IPR003663 GO:0016020|GO:0022857|GO:0055085
Ahy17g1990 544 PANTHER SUGAR TRANSPORTER 44 540 - -
Ahy17g1990 544 CDD MFS_STP 70 514 IPR044778 GO:0015145|GO:0015749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1990 Ahy-Chr17 73195429 73204000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1990 91 536 Organic Solute Cotransporters AT1G34580 65.111 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1990 K24193 - adu:107459105 1038.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1990 17 73195429 73204000 Ahy17g1990 17 73195429 73204000 ECH
Ahy17g1990 17 73195429 73204000 Ahy7g1643 7 57927941 57936207 hybridization