Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1918 ATGAAAGGAAAAGAGAAACTGAAGATAAAAGTTGCAGCCACCCAACCACTTTTAACTTCCTTGCATCTTAGCTCCCATATATATATATACTATTGTCTTCCACCATTAGTATTCCATCTTTATATTAACTTAATTGATTGCATCATGATGAGTGACGACGCAGATTTCACGATCTCCCTCCTCCACCACCACAATCTCATCATCGTCCTCGCCGTCCTCATCATCGGCGCCACTCTCTACATCATCACCCGCCCCAGGTCCATCTACCTCCTCGATTCGTCCTGCTTCGGCCCACCGGACTACCTCCGCGTCGACTACAACCGCTTCATGGAACATTCCAGACTCACGGGGGAATTTGACGACTGTGCGCTTGAATTCCAGCGCAAAATCTTGCAGCGCTCTGGTCTTGGTGAAGAAACCTACTTCCCCGAAGCTATGCATGCCATCCCTCCAAACCCCTCCATGGCCGCCGCAAGACAAGAAGCCCAACAGGTCATGTTTGGCGCGCTCGACAATCTCTTTGCCAACACCGGCATCAAGCCGAAACAAATTGGAATCCTCATCGTGAATTGCAGCTTGTTCAACCCTACACCTTCTCTTTCCGCCATGATCGTCAACAAGTACAAGCTCAGGGAGAACACAAGGACCTACAATATTTCCGGGATGGGTTGCAGTGCAGGAGTGATAGCCATCGATATCGCCAAAGACTTGCTTCAAGTTCATAGAAACACCTACGCCGTGGTGGTGAGCACAGAGAACATCACGCAGAATTGGTACTTGGGGAACAAGAAATCAATGCTCATCCCTAATTGCTTGTTCCGGATGGGCGCTTCTGCGGTGCTTCTCTCCAACAAAAGCTCCGATAGGCGGCGTTCAAAGTACAAGCTTCTTCATGTAGTGAGAACGCACAAAGGTTCAGATGACAAGGCCTACAAATGCGTGTTTCAGGAAGAGGACGATGAAGGCAAAACAGGGGTTACGCTTTCCAAAGATCTGATGACCATTGCTGGTGAGGCTCTCAAGACTAACATAACCACGCTGGGTCCATTGGTGCTTCCCATAAGTGAGCAGCTTCTGTTCTTCGTTACGCTGGTTGCAAAGAAGATGTTGAATACGAAGGTGAAGCCTTACATCCCGGATTTCAAGCTGGCTTTCAGCCATTTCTGTATCCATGCGGGGGGGAGGGCGGTGATCGACGAGCTGGAGAAGAATCTGCAGCTGAGGGCAGAGCACGTGGAAGCTTCTAGAATGACGCTGCATAGGTTCGGGAACACGTCATCGAGTTCGATATGGTACGAGTTGGCGTACACGGAGGCGAAGGGGAGAGTGAGGAAGGGACACAGAGTGTGGCAGATAGCTTTCGGGAGTGGGTTCAAGTGTAACAGTGCTGTTTGGGTTGCTCTGAAAAATGTTAAGCCTTCTCCCAAGAATCCATGGGAAGATTGCATTCATAGCTACCCTGTTCAGCTTCTCACTTAA 1479 0.4943 MKGKEKLKIKVAATQPLLTSLHLSSHIYIYYCLPPLVFHLYINLIDCIMMSDDADFTISLLHHHNLIIVLAVLIIGATLYIITRPRSIYLLDSSCFGPPDYLRVDYNRFMEHSRLTGEFDDCALEFQRKILQRSGLGEETYFPEAMHAIPPNPSMAAARQEAQQVMFGALDNLFANTGIKPKQIGILIVNCSLFNPTPSLSAMIVNKYKLRENTRTYNISGMGCSAGVIAIDIAKDLLQVHRNTYAVVVSTENITQNWYLGNKKSMLIPNCLFRMGASAVLLSNKSSDRRRSKYKLLHVVRTHKGSDDKAYKCVFQEEDDEGKTGVTLSKDLMTIAGEALKTNITTLGPLVLPISEQLLFFVTLVAKKMLNTKVKPYIPDFKLAFSHFCIHAGGRAVIDELEKNLQLRAEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRVRKGHRVWQIAFGSGFKCNSAVWVALKNVKPSPKNPWEDCIHSYPVQLLT* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1918 492 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 386 465 IPR013747 -
Ahy17g1918 492 PIRSF Very_long_ch_3-ktacl-CoA_syn 12 492 IPR012392 GO:0006633|GO:0016020|GO:0016747
Ahy17g1918 492 Pfam FAE1/Type III polyketide synthase-like protein 81 369 IPR013601 GO:0006633|GO:0016020|GO:0016747
Ahy17g1918 492 SUPERFAMILY Thiolase-like 297 465 IPR016039 GO:0016746
Ahy17g1918 492 CDD CHS_like 70 465 - -
Ahy17g1918 492 Gene3D - 107 466 IPR016039 GO:0016746
Ahy17g1918 492 PANTHER 3-KETOACYL-COA SYNTHASE 4 58 491 - -
Ahy17g1918 492 PANTHER 3-KETOACYL-COA SYNTHASE 58 491 IPR012392 GO:0006633|GO:0016020|GO:0016747
Ahy17g1918 492 SUPERFAMILY Thiolase-like 75 292 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1918 Ahy-Chr17 62379534 62385805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1918 65 490 Miscellaneous Gene Families AT1G19440 79.343 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1918 K15397 - fve:101298755 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1918 17 62379534 62385805 Ahy17g1918 17 62379534 62385805 ECH