Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1878 ATGAGTATCTGTCTCAACCTCAGAACATTGCTTCTTAACTTTGTTATTACCTTCACAATGCTTTCTCTATCTCATGAAGCAAGACAAAATCTCGATTCCCCTGTGAGAGCAGTTAGTCTTGGTGGTTGGCTCGTTACTGAAGGTTGGATCAAACCTTCTCTCTTCGATGGAATTCCAAACAAGGATTTCTTGGATGGAACTGGTCTTCAGTTCAAGTCTGTGACAACAGGGAAGTATCTGTGTGCAGAGTCCGGAGGAGGAACGATCCTAGTTGCAAACCGCACTGCCGCTTCGGGCTGGGAAACATTCAGGTTATGGAGGCTGAACGAGACCACTTTCAGATTCAGGGTGTTCAACAAGCAGTTTGTGGGATTAGATGGGATCAACGTTGTAGCTATTACCAATATTTCAACTGATTCTTTAACTTTCAATATTGTTAAGGAAAGTAATAAATCTAACCGCGTTCGAATCAAAACAACTAGTGGTAGCTATTTGCAGGCAAAGTCGGAGGTGATGGTGACTGCAGACATTTCAAAGGTAAGCGGATGGAGAGACGATGACCCAACAGTATTCCAACTGACAATTGGTGGAAGGATGCAAGGTGAGTTCCAGGTCACCAATGGTTATGGCCCACTCAAGGCTCCCCAAGTCATGAAGGACCACTGGAACAGTTTCATTGTTGAAAATGATTTGAAGATGATAGCGAGTAAGGGAATAAATGCACTTAGAATTCCGGTTGGATGGTGGATAGCAAGTGATCCAACTCCACCCTCTCCTTATGTTGCTGGTTCCTTGCATGCTCTAGACAATGCCTTCTTCTGGGCTCAGAAATATGGGTTGAAAATTATCATTGATCTTCACGCTGCACCTGGTTCCCAAAATGGGTATGAGCATAGCTCCTCCAGAGACACTTCTCAAGAATGGGGGAAAACAGATGAGAACATCCAACAAACCGTTAATGTTATAGAGTTCTTAGCTGCAAGGTACGCAAAAAGCACAAGCCTGTATGCGGTTGAGCTGATAAACGAGCCTCTATCACCAGGTGCCACCTTAGAGGCTTTGAACAAGTACTACAAAGCTGGGTATGAAGCAGTGCGCAAACACTCAAAGACAGCTTATGTTGTTTTGTCAAATCGGTTAGGGTCCTCAGACCCAAGGGAATTCTTCCCTGTTGCCACTGGCCTTATGAAAACAGTGATTGATGTCCACTACTACAGCCTCTTTGAATCCAAATTTGACAACTTAACCGTCCAACAGAACATTGATTTCATCCAAACAAACCGCTCTTCGGACTTGACTTTTGTTACAACCTCAAATGGCCCTCTTACCTTTGTCGGTGAATGGGTTTCTGAATGGAAAGTTAATGAAGCTACGAAAGAGGATTACCAAAGATTTGCAAAAGCCCAATTAGATGTTTATGGAAGAGCAACGTTTGGATGGTCTTACTGGACCTTAAAGAACGTCAACAACCATTGGAGTTTGGAATGGATGATCAACAATGGTTACATTAAGCTATAA 1518 0.4328 MSICLNLRTLLLNFVITFTMLSLSHEARQNLDSPVRAVSLGGWLVTEGWIKPSLFDGIPNKDFLDGTGLQFKSVTTGKYLCAESGGGTILVANRTAASGWETFRLWRLNETTFRFRVFNKQFVGLDGINVVAITNISTDSLTFNIVKESNKSNRVRIKTTSGSYLQAKSEVMVTADISKVSGWRDDDPTVFQLTIGGRMQGEFQVTNGYGPLKAPQVMKDHWNSFIVENDLKMIASKGINALRIPVGWWIASDPTPPSPYVAGSLHALDNAFFWAQKYGLKIIIDLHAAPGSQNGYEHSSSRDTSQEWGKTDENIQQTVNVIEFLAARYAKSTSLYAVELINEPLSPGATLEALNKYYKAGYEAVRKHSKTAYVVLSNRLGSSDPREFFPVATGLMKTVIDVHYYSLFESKFDNLTVQQNIDFIQTNRSSDLTFVTTSNGPLTFVGEWVSEWKVNEATKEDYQRFAKAQLDVYGRATFGWSYWTLKNVNNHWSLEWMINNGYIKL* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1878 505 PANTHER PUTATIVE-RELATED 13 505 - -
Ahy17g1878 505 SUPERFAMILY (Trans)glycosidases 35 503 IPR017853 -
Ahy17g1878 505 PANTHER FASCIN 13 505 IPR010431 GO:0007015|GO:0051015
Ahy17g1878 505 Gene3D - 47 185 - -
Ahy17g1878 505 SUPERFAMILY Actin-crosslinking proteins 69 183 IPR008999 -
Ahy17g1878 505 Gene3D Glycosidases 186 505 - -
Ahy17g1878 505 Pfam Cellulase (glycosyl hydrolase family 5) 222 487 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1878 Ahy-Chr17 59357522 59370704 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1878 - - gmx:100790619 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1878 17 59357522 59370704 Ahy17g1878 17 59357522 59370704 ECH
Ahy17g1878 17 59357522 59370704 Ahy7g1618 7 56002718 56015992 hybridization