Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1874 ATGGGCCTTAAAGTGCAATTTCTTTTGCTTTTGTGCATTATTCTTCCAGCAATGGTTTCAGGAATACGCTTCATACGCATAAATAATAACAACCCTTTCTCTGTGAAGGGTCGAGTTTATTGTGACCCTTGCCGTTTTAGTTTTGAGAGCCTTGCCACCACATACATTGCTGGTGCGGAGGTTATTTTACAATGCAAGGACAGGATCACAAATGACATTGTTTTCAGCAAACAAAGCCAAACTGATTCATCAGGAGCATATACAATAAATGTCGACGCAGATTTTGAAAACCAAGTTTGTGATGTGAAGCTTTTAAGCAGTTCACAAGATGATTGCAAAGAACCTGCGTTAGGTCGTGACCAATCTCGTGTCATACTCAACCGTTTCAATGGCATTGCCACCAATGATAGGTTTGTTAACAACTTGGGTTTCATGAAGAATGAAGCTTTGTCGGGTTGTGCCGATATTCTAAGGAAGTACTACAAATTCGGTTCTAAGAATTAG 504 0.3988 MGLKVQFLLLLCIILPAMVSGIRFIRINNNNPFSVKGRVYCDPCRFSFESLATTYIAGAEVILQCKDRITNDIVFSKQSQTDSSGAYTINVDADFENQVCDVKLLSSSQDDCKEPALGRDQSRVILNRFNGIATNDRFVNNLGFMKNEALSGCADILRKYYKFGSKN* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1874 167 PANTHER ALLERGEN-LIKE PROTEIN BRSN20 5 163 - -
Ahy17g1874 167 Pfam Pollen protein Ole e 1 like 35 116 - -
Ahy17g1874 167 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 5 163 IPR006041 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1874 Ahy-Chr17 58847599 58848946 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1874 - - aip:107607324 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1874 17 58847599 58848946 Ahy17g1874 17 58847599 58848946 ECH
Ahy17g1874 17 58847599 58848946 Ahy8g0635 8 12507739 12509487 hybridization
Ahy17g2928 17 129122413 129123997 Ahy17g1874 17 58847599 58848946 PCT
Ahy7g1624 7 56191684 56193072 Ahy17g1874 17 58847599 58848946 PCT
Ahy17g1874 17 58847599 58848946 Ahy17g2928 17 129122413 129123997 PCT
Ahy17g1874 17 58847599 58848946 Ahy7g1624 7 56191684 56193072 PCT