Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1862 ATGGATAGCATAATGAGCAAGCTTCGTAATCTTGACGCTTACCCTAAAATCAATGAGGATTTCTACAGCAGAACACTTTCCGGCGGCGTCATTACCCTTGCTTCCTCCGTTCTCATGATCTTGCTCTTCATCTCCGAGCTTCGATTGTATCTGCATGCTTCAACTGAGACAAAGCTTATTGTGGATACTTCTAGAGGTGAAACGCTGCGTATCAATTTTGATGTTACTTTTCCTGCCCTACCGTGCTCGATGCTCAGTGTTGATGCAATGGACATTAGTGGAGAGCAACATCTCGATGTAAGACATGATATAATCAAGAAAAGGTTAGATACTCAAGGCAATGTAATAGGTACAAGGCAAGATGGAATTGGTTCTCCCAAGATTGAAAATCCCTTGCAAAAGCATGGAGGCAGGCTAGAGCACAATGAGACTTATTGTGGTTCCTGCTATGGGGCAGAAGAGTCAGATGATGATTGTTGTAATTCCTGTGAGGATGTTCGTGAAGCATATCGGAAAAAAGGTTGGGCAGTCTCAAATCCAGATTTAATTGATCAGTGCAAAAGGGAAGGATTCTTGCAAAGAATCAAGGAAGAAGACGGTGAAGGATGCAACATATATGGCTTCTTGGAAGTAAATAAGGTGGCAGGTAATTTTCATTTTGCTCCGGGCAAAAGCTTTCAGCAATCTGGTGTACATGTACATGATCTGCTGGCTTTTCAAAAGGACTCGTTTAATTTAAGTCACCACATCAACAGATTAGCTTTTGGTGATTATTTTCCTGGTGTGGTGAATCCTCTTGATCGTGCACATTGGACTCAGAAAACACCAAGTGGGATGTATCAATATTTTATTAAGGTTGTGCCTACTGTTTACTCTGATGTGAGAGGACATACTATCCAAACAAACCAGTTCTCTGTGACAGAACACTTCAAGACTGGGGATGTGGGCCGATTCCAGTCCCTTCCCGGAGTTTTCTTCTTCTATGACCTTTCTCCAATTAAGGTTACCTTTACAGAAGAACCTGTCTCATTCTTGCATTTCCTTACTAATGTCTGTGCCATAGTTGGAGGTGTTTACACTGTATCTGGAATACTAGATTCGTTTATCTATCACGGTCAACGGGCTATCAAGAAGAAGATGGAACTTGGTAAATTTAACTGA 1161 0.416 MDSIMSKLRNLDAYPKINEDFYSRTLSGGVITLASSVLMILLFISELRLYLHASTETKLIVDTSRGETLRINFDVTFPALPCSMLSVDAMDISGEQHLDVRHDIIKKRLDTQGNVIGTRQDGIGSPKIENPLQKHGGRLEHNETYCGSCYGAEESDDDCCNSCEDVREAYRKKGWAVSNPDLIDQCKREGFLQRIKEEDGEGCNIYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQKDSFNLSHHINRLAFGDYFPGVVNPLDRAHWTQKTPSGMYQYFIKVVPTVYSDVRGHTIQTNQFSVTEHFKTGDVGRFQSLPGVFFFYDLSPIKVTFTEEPVSFLHFLTNVCAIVGGVYTVSGILDSFIYHGQRAIKKKMELGKFN* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1862 386 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 8 97 IPR039542 -
Ahy17g1862 386 Pfam Endoplasmic reticulum vesicle transporter 149 366 IPR012936 -
Ahy17g1862 386 PANTHER ENDOPLASMIC RETICULUM VESICLE TRANSPORTER PROTEIN 2 386 - -
Ahy17g1862 386 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 2 386 IPR045888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1862 Ahy-Chr17 57742773 57749312 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1862 K20367 - gmx:100782309 741.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1862 17 57742773 57749312 Ahy17g1862 17 57742773 57749312 ECH
Ahy17g1862 17 57742773 57749312 Ahy7g1633 7 56615777 56622392 hybridization