Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1854 ATGAGAATAAGAATGGCGGCGACGTGGGGTTGCCGTAGCATTCTTATGTCTGCGCTGCTACTTTCCATGATGGTTTCATCCACCACTGCTTTCGGTCTTCGCAAGAGGGATGATTCCCCCCAGAATGTGACTTACGATGGCAGGTCCCTCTTCATCAACGGCAGACGGGAGCTCCTCTTCTCTGGTTCCATCCACTACCCTCGTAGCACTCCTGACATGTGGCCTGATCTTCTTGACAAGGCAAGACATGGAGGCCTGAACACCATCCAGACCTACGTCTTCTGGAATCTCCATGAGCCAGAGAAAGGCAAGTTCAACTTTGAAGGGAACGCCGATCTTATTAAGTTCATTAAGCTCATTCAAGAGAGAGGGATGTATTTGATCCTAAGGCTGGGCCCTTTCATCCAAGCGGAATGGAATCATGGTGGGCTTCCATATTGGCTAAGAGATGTCCCTGGCATCTATTTCCGCTCTAACAATGAACCCTTCAAGTTGCACATGAAGGAATACGTGATGAGGATAGTACAAATGATGAAGGACAATAAGTTTTTTGCTTCCCAGGGAGGACCCATCATCTTGGCGCAGATCGAGAATGAGTACAACCAAATACAACTTGCTTACGACGAACGCGGCATAGAGTATGTGAACTGGGCGGCCCAGATGGCAGTGGAAACCAACATCGGAGTGCCGTGGATCATGTGCAAGCAGAAGGAAGCCCCTGATCCAGTTATCAATTCATGCAATGGAAGGCACTGTGGTGATACCTTCCTTGGACCCAACAAGCCATACAAACCCCGGGTCTGGACAGAGAACTGGACTGTCCAATACAGAGTGTATGGAGACCCTGTATCCAGGAGATCAGCAGAAGATATTGGCTTGTCCATGGCCCGCTTCTTCTCCAAGGACGGCAGTGTGGCCAACTACTACATGTATCATGGTGGAACCAACTTTGGAAGAAATGCCGCTGCTTTTAAAGTAACCGGTTATTACGATGCAGCGCCTCTCGATGAATACGGCATGACAAAGGAACCAAAATGGGGTCATCTTAGAGATGTCCACAGGGCTATCAACCTCTGTAAGAAGGCTCTAATTTATGGTACATCCACTACCCAAAAGTTAAATGAATTCCATGAGATTCGAGTCTATGAGAAACCCGGAACTCCCATCTGTGCTGCTTTCCTCTTTAATAACCACAGCACGGAAGCTGTCACTATTAACTTCAGAGGCAAGAATTTCTTTGTTCCTGGACACTCCATCAGCATTATCCCAGATTGCAAGAATGAGGTCCTCAACACTGACAATATCATTGCACAACACAATTATAGGACCTTCACGAGATCCAAACTCGCAAACAATCACGAGTGGGAGGTGTTCAGTGAGCCAATTCCAACTACCGCTGAAGTAGTGCCAGGTAACATGACAGCTCCTCCTGAGCTTTTCACCTTCCTTAAGGACACCACAGACTATGCATGGTACACCGTTAGCTTTGACTTCGACCCAGAAGACTTGCTCAAGAATGGAACACTCCCAAACCTTCATATCTTTAGTTTTGGACATGGATTGCTTGCATTCGTGAATGGAGAATACGTTGGATCTGGACACGGCACGAGCGAAAGAGCACAGTTTAAAATGCTAATAAAGGGTATAAATTTGAAGGCCGGGAAGAATGAGATATCCATCATGGCTTACGTAACTGGATTACACGATAGCGGAGCATACATGGAACACAGGTTTGCAGGACCGGCTGAAGTAAGGATCGACGGGCTGGAGACGAAAATGGGACATATTGAACTGGCAAAAAGAAGATTCAAATGGGGTGCCAGGGCTGGTCTGGAAGGGGAGAAGAAGGAGATATACACGGAGAAAGGGTCAAAGAAGGTGTCATGGGAGAAAGTGGGAGAGAAGGGAAGAGTAGGGCCTGCTTTATCATGGTACAAGACAAGATTCACAACTCCAGAGGGAAGGGAACCAGTGGCGATACGGATGACCGGCATGAAGAAGGGAATGATGTGGGTGAACGGCAATGGCCTTGGGCGTCACTGGGTGGACTACAAGGTACGTGGCACTGACGAGCCTAGCCAGGATGTATTCCACATCCCAAGATCCTTCCTCAACCCAAGGGACAACCTCCTTGTTATCTTTGAGGAAGAGCCATCCAACCCGGAGAACGTCCAGATCGAGCTCGTCTCCAGAGACACCGTCTGCAGCTACGTCCATGACTTCTTTGCGCCTGCTGTCCAGTCATGGAACGCCAAGCCCGGGGATGAGGAAGGAGAATTGCAGACCTCCGAGCCTCTCTCGAAGCCCCACGCTTCTGTCAAGTGCCCCAACAAGAAGAAGATCATCTCTGTTGACTTTGCAAGCTTCGGCAACCCATCCGGCGACTGTGGTTCCTTCCAGCTAGGCAACTGCACCTTTGATGCCGCCCTCACCAGGGACGTTGTCGAGAAGGCCTGCTTAGGAAAGGAGTTCTGCAAGCTTCCCGTCGACCCCGAACTCTTCGGCGCCGCCCCACGTGCTTGCTCTGCTCTTCCCTTTAAGACTATTGCAATCCAAGTCAAATGCTCCTATTAG 2574 0.493 MRIRMAATWGCRSILMSALLLSMMVSSTTAFGLRKRDDSPQNVTYDGRSLFINGRRELLFSGSIHYPRSTPDMWPDLLDKARHGGLNTIQTYVFWNLHEPEKGKFNFEGNADLIKFIKLIQERGMYLILRLGPFIQAEWNHGGLPYWLRDVPGIYFRSNNEPFKLHMKEYVMRIVQMMKDNKFFASQGGPIILAQIENEYNQIQLAYDERGIEYVNWAAQMAVETNIGVPWIMCKQKEAPDPVINSCNGRHCGDTFLGPNKPYKPRVWTENWTVQYRVYGDPVSRRSAEDIGLSMARFFSKDGSVANYYMYHGGTNFGRNAAAFKVTGYYDAAPLDEYGMTKEPKWGHLRDVHRAINLCKKALIYGTSTTQKLNEFHEIRVYEKPGTPICAAFLFNNHSTEAVTINFRGKNFFVPGHSISIIPDCKNEVLNTDNIIAQHNYRTFTRSKLANNHEWEVFSEPIPTTAEVVPGNMTAPPELFTFLKDTTDYAWYTVSFDFDPEDLLKNGTLPNLHIFSFGHGLLAFVNGEYVGSGHGTSERAQFKMLIKGINLKAGKNEISIMAYVTGLHDSGAYMEHRFAGPAEVRIDGLETKMGHIELAKRRFKWGARAGLEGEKKEIYTEKGSKKVSWEKVGEKGRVGPALSWYKTRFTTPEGREPVAIRMTGMKKGMMWVNGNGLGRHWVDYKVRGTDEPSQDVFHIPRSFLNPRDNLLVIFEEEPSNPENVQIELVSRDTVCSYVHDFFAPAVQSWNAKPGDEEGELQTSEPLSKPHASVKCPNKKKIISVDFASFGNPSGDCGSFQLGNCTFDAALTRDVVEKACLGKEFCKLPVDPELFGAAPRACSALPFKTIAIQVKCSY* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1854 857 Pfam Glycosyl hydrolases family 35 49 355 IPR031330 -
Ahy17g1854 857 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 188 200 IPR019801 GO:0004553|GO:0005975
Ahy17g1854 857 PRINTS Glycosyl hydrolase family 35 signature 667 683 IPR001944 GO:0004553|GO:0005975
Ahy17g1854 857 PRINTS Glycosyl hydrolase family 35 signature 186 201 IPR001944 GO:0004553|GO:0005975
Ahy17g1854 857 PRINTS Glycosyl hydrolase family 35 signature 640 654 IPR001944 GO:0004553|GO:0005975
Ahy17g1854 857 PRINTS Glycosyl hydrolase family 35 signature 129 148 IPR001944 GO:0004553|GO:0005975
Ahy17g1854 857 PRINTS Glycosyl hydrolase family 35 signature 304 319 IPR001944 GO:0004553|GO:0005975
Ahy17g1854 857 PRINTS Glycosyl hydrolase family 35 signature 53 70 IPR001944 GO:0004553|GO:0005975
Ahy17g1854 857 PRINTS Glycosyl hydrolase family 35 signature 323 339 IPR001944 GO:0004553|GO:0005975
Ahy17g1854 857 PRINTS Glycosyl hydrolase family 35 signature 74 92 IPR001944 GO:0004553|GO:0005975
Ahy17g1854 857 PRINTS Glycosyl hydrolase family 35 signature 267 282 IPR001944 GO:0004553|GO:0005975
Ahy17g1854 857 SUPERFAMILY Galactose-binding domain-like 602 752 IPR008979 -
Ahy17g1854 857 Gene3D Glycosidases 40 359 - -
Ahy17g1854 857 Gene3D - 760 857 IPR043159 -
Ahy17g1854 857 SUPERFAMILY Galactose-binding domain-like 419 576 IPR008979 -
Ahy17g1854 857 Gene3D - 605 737 - -
Ahy17g1854 857 PANTHER BETA-GALACTOSIDASE RELATED 17 844 IPR001944 GO:0004553|GO:0005975
Ahy17g1854 857 Pfam Galactose binding lectin domain 774 855 IPR000922 GO:0030246
Ahy17g1854 857 ProSiteProfiles SUEL-type lectin domain profile. 765 856 IPR000922 GO:0030246
Ahy17g1854 857 SUPERFAMILY (Trans)glycosidases 40 359 IPR017853 -
Ahy17g1854 857 Pfam Beta-sandwich domain in beta galactosidase 363 434 IPR041392 -
Ahy17g1854 857 Pfam Beta-galactosidase jelly roll domain 632 713 IPR025300 -
Ahy17g1854 857 PANTHER GLYCOSIDE HYDROLASE FAMILY 35 PROTEIN 17 844 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1854 Ahy-Chr17 55861831 55865327 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1854 43 855 Glycoside Hydrolase AT2G16730 54.167 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1854 - - gmx:102663614 1040.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1854 17 55861831 55865327 Ahy17g1854 17 55861831 55865327 ECH