Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1741 ATGACTAGCAAAACTGATGAATCAGTTCAGGAAAATGATGGTGCTCCTAATCTCGATCCTCAACCTCAACCTGAGTCCCAAACTGGGTCACCAGAGCATCCTCTTTTCAAGAGTAGCAGTAGCACCAAGGTTTTCAAAAGTGGGCCACTTTTCATATCTTCCAAAGGTATTGGATGGACATCCTGGAAGAAAAGGTGGTTTGTTTTAACACAAACTTCACTTGTTTTCTTTAGAAGTGATCCAAATGTTGCTTCTCAAAAGGGAAATGAAGTAAATTTGACCCTTGGTGGCATTGACCTCAACAATTCAGGCAGTGTTATTGTCAAGCCAGATAAAAAACTTTTGACTGTACAATTTTCTGATGTTCATGATGGACGGTCAGTTACACTTAAGGCTGAAACAAATGAAGATCTCTATGAGTGGAAAACTGCACTTGAGAATGCTTTGGCACAAGCACCAAATCCAACTGACATGATAGGGCAAAATGGTGTTTTAAAGAATGATCAGTTTGATTCACTTGATAGTTCTTCAGACCAATTGAAGGATAAAGAACTAAAGAAATATTCAGTCATGGGTCGTCCAGTTTTACTTGCTTTGGAAGATCCTGATGGAACTCCATCATTTTTGGAGAAAGCCATGAGATACATAGAGGAGCATGGAGTCAAAGCAGAAGGGATCCTGCGACAAGCAGCGGATGTTGAGCAAGTTGAACAACGAGTACGAGAATATGAACAAGGAAAAGTTGAATTTTTTGAAAACGAAGATGCACATATTATTGGTGACTGCATTAAGCATGTACTTCGAGAAATGCCATCTGCTCCAATCCCTGCATCTTGTTGCAAGGCATTATTAGAAGCTAGTCGAAGTGGACGTGGTGCCAACAGGATTTCTGCAATGCGTGCAGCAATATATGATACTTTTCCTGAGCCAAACCGTCGTTTGTTACAAAGAATACTCTTGATGATGCAAGCTGTTGCGTCATTCAAAGCTGTAAACAAAATGAGTCTGTCAGCTGTTGCTGCTTGCATGGCACCATTGCTTCTTCGCCCTCTTCTAGCTGGAGAATGTGAAATTGAAAATGATTTTGATGTAGGTGGTGATAGTTCTGCTCAACTTCTACAAGCTGCTGCAGCTGCAAACCATGCTCAATCTATTGTTATTACTTTATTAGAAGAATATGACGCCTTCTTTGGAGAAGATTGCGTGTCCCCTGGGCCAGATATGTACACCGATTCAGATGGGAGCGAAACTGGGAGTGAGGAATTTACTGATGATGATGATGTGTCATATGAGGAAGAATATGATGATGATGAGGAAGGTGAATCAATAGAGGGATCCGAACTTGATGAAGAGGATGATATTGGTAGTGAAACTGGTAGTGAAACTGGAGATTCTGTGAAGAATGATAAAAATGATGATAAGGTACATAATCATTCAAGTTCAACTTCAAAATCTTTAGAGGTGAGTAAAGATTATAAAGTTCAAAAGATGCCATCGACTAGACTTGAGCAAGCAGTTCCTCAACAAGAAGATACCAAGAGATATGAAAATACTTGTGAAAATGAGTCTAGTAAGCCTCCTAATGTAGTAGGAGGAAAACTTTCTAGGGTTCGAACTACAAAGAATGAACACAATGTTCCTATCCCACCACATATGACAAAATCAGCAACTTTAACGAATGTCGCAGCACCTCAACGTCCCACTATGTTGGGGAGAACTTCAGCAAAGAAAAATCTTTCTATGGAATCCATTCAGTTCATTGAAGAAGATGATGAAGTTGGAATTGAGAGGCTTGAAACTATTAAGACAGAATTGCAAAACCAAATTGCAGATGAGGCAAAAGAAAATTCGAAGCTATTATCTGATATGCAAAAACGAAAAGAAGCCTTGCCAGAGCATCATTTGGCTCTTGAGCGAGAGGTTGTTATGTTACAAGAACAATTGCGAAAGGAGAAGAGTTGTCGAACAACACTTGAAGCAGGACTCAAGATGCCTCCTAGGCCCTTGTCAAAATCCGATATTGATGAAAAGATCATGTCAGATCTTGAGGAGTTATTATTAGTAGAAGAAGATCTTGCCAAAATAAAAAGGAAGCTTGATGAGCTTAGGGTACGACTTAGTTTACTTGGACAGGGTTATAGTTCTGTGCAGGATTCTTCCAATCAACCTCAACATATAATAGATCTTGATATGAAAAATACACAAGACACTGAAGTTGCAGAGAGGTCAACAACAAAGGACACTAAATTTGGGGGAGCAGAATCTGAGAATGCTACAAAGCATGAGTTAAAACATTTGTCTAGCAAAAAATCTAGTTCTAAGAAATACGGTGCTTGGAATGAACAAACAACAAATTCACAACCTGCCAATGCATTGACAAAACTGACATCAAGACTCAGCTTTTTGAATGATCGTCGAGAGGTTAACAACTCTTCGAATAAAGTAGAAAAGATTAAAGGAGGTGAACTTCACCCACCAATAGCATCTCCAAAGAAATCTCGAGGATTTGAATTTTACCTACCACTTACATCCACAAGCAAGAACCAATATGACTTTCACTTGCCAATTTTATCTCCTAATAAGAATAAAGGAGCAGAAAATCTTCAAAATCCGGACAAACTTAAAAAAATGGGAAGTCAAACAGGACACCGACACTCTGATAAACAAAACCAATACTTGAGAAGAGGAATGTCAGAAAGCCATCATCAACCTTATGATTCGGATAATGTTCAGTAA 2736 0.39 MTSKTDESVQENDGAPNLDPQPQPESQTGSPEHPLFKSSSSTKVFKSGPLFISSKGIGWTSWKKRWFVLTQTSLVFFRSDPNVASQKGNEVNLTLGGIDLNNSGSVIVKPDKKLLTVQFSDVHDGRSVTLKAETNEDLYEWKTALENALAQAPNPTDMIGQNGVLKNDQFDSLDSSSDQLKDKELKKYSVMGRPVLLALEDPDGTPSFLEKAMRYIEEHGVKAEGILRQAADVEQVEQRVREYEQGKVEFFENEDAHIIGDCIKHVLREMPSAPIPASCCKALLEASRSGRGANRISAMRAAIYDTFPEPNRRLLQRILLMMQAVASFKAVNKMSLSAVAACMAPLLLRPLLAGECEIENDFDVGGDSSAQLLQAAAAANHAQSIVITLLEEYDAFFGEDCVSPGPDMYTDSDGSETGSEEFTDDDDVSYEEEYDDDEEGESIEGSELDEEDDIGSETGSETGDSVKNDKNDDKVHNHSSSTSKSLEVSKDYKVQKMPSTRLEQAVPQQEDTKRYENTCENESSKPPNVVGGKLSRVRTTKNEHNVPIPPHMTKSATLTNVAAPQRPTMLGRTSAKKNLSMESIQFIEEDDEVGIERLETIKTELQNQIADEAKENSKLLSDMQKRKEALPEHHLALEREVVMLQEQLRKEKSCRTTLEAGLKMPPRPLSKSDIDEKIMSDLEELLLVEEDLAKIKRKLDELRVRLSLLGQGYSSVQDSSNQPQHIIDLDMKNTQDTEVAERSTTKDTKFGGAESENATKHELKHLSSKKSSSKKYGAWNEQTTNSQPANALTKLTSRLSFLNDRREVNNSSNKVEKIKGGELHPPIASPKKSRGFEFYLPLTSTSKNQYDFHLPILSPNKNKGAENLQNPDKLKKMGSQTGHRHSDKQNQYLRRGMSESHHQPYDSDNVQ* 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1741 911 MobiDBLite consensus disorder prediction 404 532 - -
Ahy17g1741 911 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 5 817 - -
Ahy17g1741 911 SUPERFAMILY GTPase activation domain, GAP 202 399 IPR008936 GO:0007165
Ahy17g1741 911 Coils Coil 595 622 - -
Ahy17g1741 911 Gene3D Rho GTPase activation protein 174 399 IPR008936 GO:0007165
Ahy17g1741 911 Gene3D - 34 151 IPR011993 -
Ahy17g1741 911 Pfam Leucine-zipper of ternary complex factor MIP1 632 706 IPR025757 -
Ahy17g1741 911 MobiDBLite consensus disorder prediction 877 902 - -
Ahy17g1741 911 CDD PH 46 145 - -
Ahy17g1741 911 SMART RhoGAP_3 203 394 IPR000198 GO:0007165
Ahy17g1741 911 MobiDBLite consensus disorder prediction 1 41 - -
Ahy17g1741 911 MobiDBLite consensus disorder prediction 417 458 - -
Ahy17g1741 911 MobiDBLite consensus disorder prediction 856 911 - -
Ahy17g1741 911 PANTHER RHO GTPASE-ACTIVATING PROTEIN REN1 5 817 - -
Ahy17g1741 911 SUPERFAMILY PH domain-like 13 150 - -
Ahy17g1741 911 Coils Coil 685 705 - -
Ahy17g1741 911 MobiDBLite consensus disorder prediction 463 480 - -
Ahy17g1741 911 Pfam PH domain 45 149 IPR001849 -
Ahy17g1741 911 Pfam RhoGAP domain 206 350 IPR000198 GO:0007165
Ahy17g1741 911 MobiDBLite consensus disorder prediction 733 785 - -
Ahy17g1741 911 ProSiteProfiles PH domain profile. 43 150 IPR001849 -
Ahy17g1741 911 SMART PH_update 44 152 IPR001849 -
Ahy17g1741 911 MobiDBLite consensus disorder prediction 733 766 - -
Ahy17g1741 911 CDD RhoGAP 206 345 - -
Ahy17g1741 911 ProSiteProfiles Rho GTPase-activating proteins domain profile. 197 397 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1741 Ahy-Chr17 42646342 42663605 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1741 - - cam:101498807 864.374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1741 17 42646342 42663605 Ahy17g1741 17 42646342 42663605 ECH
Ahy17g1741 17 42646342 42663605 Ahy8g0724 8 14225573 14235271 hybridization